RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ALG5Q9Y673 324 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 LY96Q9Y6Y9 160 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 IGHV3-16A0A0C4DH30 117 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 EREGO14944 169 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 TYMSP04818 313 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 HSD17B11Q8NBQ5 300 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 OR4C5Q8NGB2 326 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 OR2G3Q8NGZ4 309 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
SNX6-210ENST00000557341 K7EP13 123 aa9.65□□□□□ -0.86
SNX6-210ENST00000557341 GNRH2O43555 120 aa9.65□□□□□ -0.86
SNX6-210ENST00000557341 STAG3L2P0CL84 134 aa9.65□□□□□ -0.86
SNX6-210ENST00000557341 STAG3L3P0CL85 134 aa9.65□□□□□ -0.86
SNX6-210ENST00000557341 WFDC10BQ8IUB3 73 aa9.65□□□□□ -0.86
SNX6-210ENST00000557341 C5orf17Q8NAS9 161 aa9.65□□□□□ -0.86
SNX6-210ENST00000557341 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
SNX6-210ENST00000557341 PSMG3Q9BT73 122 aaPredicted RBP9.65□□□□□ -0.86
SNX6-210ENST00000557341 K7EQM0 130 aa9.64□□□□□ -0.87
SNX6-210ENST00000557341 PTTG1O95997 202 aa9.64□□□□□ -0.87
SNX6-210ENST00000557341 Q8N1X5 172 aa9.64□□□□□ -0.87
SNX6-210ENST00000557341 ASB13Q8WXK3 278 aa9.64□□□□□ -0.87
SNX6-210ENST00000557341 AQP10Q96PS8 301 aa9.64□□□□□ -0.87
SNX6-210ENST00000557341 MBP02144 154 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 TCRAP04437 139 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 EVI2AP22794 236 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 ZFP69Q49AA0 526 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 CDPF1Q6NVV7 123 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 SH2D6Q7Z4S9 175 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 SGK494Q96LW2 274 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 BATF3Q9NR55 127 aa9.63□□□□□ -0.87
SNX6-210ENST00000557341 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 ATP6V0CP27449 155 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 GCHFRP30047 84 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 SERF2P84101 59 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 NHLRC2Q8NBF2 726 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 SUN5Q8TC36 379 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 RAB24Q969Q5 203 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 MED28Q9H204 178 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 MSRB1Q9NZV6 116 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 TNFRSF18Q9Y5U5 241 aa9.62□□□□□ -0.87
SNX6-210ENST00000557341 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 FBLL1A6NHQ2 334 aaKnown RBP9.61□□□□□ -0.87
SNX6-210ENST00000557341 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 CXorf1O96002 111 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 GATA1P15976 413 aaPredicted RBP9.61□□□□□ -0.87
SNX6-210ENST00000557341 PPT1P50897 306 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 C10orf126Q8N4M7 172 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 SH3BGRL3Q9H299 93 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 SCRT2Q9NQ03 307 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 TMEM167BQ9NRX6 74 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 PSG8Q9UQ74 426 aa9.61□□□□□ -0.87
SNX6-210ENST00000557341 TAAR5O14804 337 aa9.6□□□□□ -0.87
SNX6-210ENST00000557341 GCGP01275 180 aa9.6□□□□□ -0.87
SNX6-210ENST00000557341 PFN1P07737 140 aaKnown RBP9.6□□□□□ -0.87
SNX6-210ENST00000557341 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
SNX6-210ENST00000557341 ZNF876PQ49A33 203 aa9.6□□□□□ -0.87
SNX6-210ENST00000557341 SMUG1Q53HV7 270 aa9.6□□□□□ -0.87
SNX6-210ENST00000557341 CYB561D1Q8N8Q1 229 aa9.6□□□□□ -0.87
SNX6-210ENST00000557341 TMEM75Q8N9X5 138 aa9.6□□□□□ -0.87
SNX6-210ENST00000557341 ACTR3CQ9C0K3 210 aaPredicted RBP9.6□□□□□ -0.87
SNX6-210ENST00000557341 A0A087WTM6 91 aa9.59□□□□□ -0.87
SNX6-210ENST00000557341 CIDEAO60543 219 aa9.59□□□□□ -0.87
SNX6-210ENST00000557341 CRYGDP07320 174 aa9.59□□□□□ -0.87
SNX6-210ENST00000557341 GIPP09681 153 aaPredicted RBP9.59□□□□□ -0.87
SNX6-210ENST00000557341 TIRAPP58753 221 aa9.59□□□□□ -0.87
SNX6-210ENST00000557341 SUMO1P63165 101 aaKnown RBP9.59□□□□□ -0.87
SNX6-210ENST00000557341 FLI1Q01543 452 aaPredicted RBP9.59□□□□□ -0.87
SNX6-210ENST00000557341 RHOHQ15669 191 aa9.59□□□□□ -0.87
SNX6-210ENST00000557341 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
SNX6-210ENST00000557341 TNFSF18Q9UNG2 199 aa9.59□□□□□ -0.87
SNX6-210ENST00000557341 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 IGLV2-11P01706 119 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNX6-210ENST00000557341 CFAP126Q5VTH2 177 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 SLC25A29Q8N8R3 303 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 INO80EQ8NBZ0 244 aaPredicted RBP9.58□□□□□ -0.88
SNX6-210ENST00000557341 C9orf85Q96MD7 179 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 PRADC1Q9BSG0 188 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 EPDR1Q9UM22 224 aa9.58□□□□□ -0.88
SNX6-210ENST00000557341 BORCS7-ASMTA0A0B4J1R7 106 aa9.57□□□□□ -0.88
SNX6-210ENST00000557341 TRBV6-4A0A1B0GX49 114 aa9.57□□□□□ -0.88
SNX6-210ENST00000557341 RS1O15537 224 aa9.57□□□□□ -0.88
SNX6-210ENST00000557341 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
SNX6-210ENST00000557341 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
SNX6-210ENST00000557341 FXYD6-FXYD2A0A087WZ82 144 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 TRAV8-6A0A0B4J262 113 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 A0A1W2PRE2 83 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 RNF222A6NCQ9 220 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
SNX6-210ENST00000557341 Q5BKY6 102 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 ZNF506Q5JVG8 444 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 RPL7L1Q6DKI1 246 aaKnown RBP9.56□□□□□ -0.88
SNX6-210ENST00000557341 DPPA3Q6W0C5 159 aa9.56□□□□□ -0.88
SNX6-210ENST00000557341 PTH2Q96A98 100 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms