RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ODF3BA8MYP8 253 aa11.53□□□□□ -0.56
NEK9-209ENST00000556170 C14orf178Q8N769 122 aaPredicted RBP11.53□□□□□ -0.56
NEK9-209ENST00000556170 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
NEK9-209ENST00000556170 TSSC4Q9Y5U2 329 aaPredicted RBP11.53□□□□□ -0.56
NEK9-209ENST00000556170 FOXE3Q13461 319 aa11.52□□□□□ -0.56
NEK9-209ENST00000556170 LOC107984156A0A0G2JMH3 177 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 B4DSR2 109 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 BUB3O43684 328 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 ARL17AQ8IVW1 177 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 COL27A1Q8IZC6 1860 aaPredicted RBP11.52□□□□□ -0.57
NEK9-209ENST00000556170 CD7P09564 240 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 SEC11AP67812 179 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 HSD52Q0P140 79 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 ZNF80P51504 273 aaPredicted RBP11.52□□□□□ -0.57
NEK9-209ENST00000556170 C11orf71Q6IPW1 123 aa11.52□□□□□ -0.57
NEK9-209ENST00000556170 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
NEK9-209ENST00000556170 IGHV3OR16-12A0A075B7B8 117 aa11.51□□□□□ -0.57
NEK9-209ENST00000556170 CRIP1P50238 77 aa11.51□□□□□ -0.57
NEK9-209ENST00000556170 PSMG4Q5JS54 123 aa11.51□□□□□ -0.57
NEK9-209ENST00000556170 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
NEK9-209ENST00000556170 GEMIN7Q9H840 131 aaKnown RBP11.51□□□□□ -0.57
NEK9-209ENST00000556170 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
NEK9-209ENST00000556170 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
NEK9-209ENST00000556170 KLF5Q13887 457 aaPredicted RBP11.51□□□□□ -0.57
NEK9-209ENST00000556170 PRRC2AP48634 2157 aaKnown RBP11.5□□□□□ -0.57
NEK9-209ENST00000556170 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
NEK9-209ENST00000556170 TMEM158Q8WZ71 300 aa11.5□□□□□ -0.57
NEK9-209ENST00000556170 ZNF48Q96MX3 618 aaPredicted RBP11.5□□□□□ -0.57
NEK9-209ENST00000556170 ANAPC13Q9BS18 74 aa11.5□□□□□ -0.57
NEK9-209ENST00000556170 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
NEK9-209ENST00000556170 TRAV12-3A0A0B4J271 114 aa11.5□□□□□ -0.57
NEK9-209ENST00000556170 BVES-AS1Q5T3Y7 98 aa11.5□□□□□ -0.57
NEK9-209ENST00000556170 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
NEK9-209ENST00000556170 TRAV21A0A0B4J279 112 aa11.49□□□□□ -0.57
NEK9-209ENST00000556170 LOXL1Q08397 574 aaPredicted RBP11.49□□□□□ -0.57
NEK9-209ENST00000556170 SAMD5Q5TGI4 173 aa11.49□□□□□ -0.57
NEK9-209ENST00000556170 IGLV2-11P01706 119 aa11.49□□□□□ -0.57
NEK9-209ENST00000556170 KIR3DS1Q14943 382 aa11.49□□□□□ -0.57
NEK9-209ENST00000556170 ZNF56Q15929 161 aa11.49□□□□□ -0.57
NEK9-209ENST00000556170 SFTA2Q6UW10 78 aa11.49□□□□□ -0.57
NEK9-209ENST00000556170 GTSCR1Q86UQ5 136 aa11.49□□□□□ -0.57
NEK9-209ENST00000556170 ZNF256Q9Y2P7 627 aaPredicted RBP11.49□□□□□ -0.57
NEK9-209ENST00000556170 ANKRD17O75179 2603 aaKnown RBP11.49□□□□□ -0.57
NEK9-209ENST00000556170 FN1P02751 2386 aaKnown RBP11.48□□□□□ -0.57
NEK9-209ENST00000556170 C9orf139Q6ZV77 190 aa11.48□□□□□ -0.57
NEK9-209ENST00000556170 DYNLRB2Q8TF09 96 aa11.48□□□□□ -0.57
NEK9-209ENST00000556170 SCGB3A1Q96QR1 104 aa11.48□□□□□ -0.57
NEK9-209ENST00000556170 BEX4Q9NWD9 120 aaPredicted RBP11.48□□□□□ -0.57
NEK9-209ENST00000556170 RELNP78509 3460 aa11.48□□□□□ -0.57
NEK9-209ENST00000556170 FSTL3O95633 263 aa11.48□□□□□ -0.57
NEK9-209ENST00000556170 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
NEK9-209ENST00000556170 UNQ9165/PRO28630Q6UXU0 137 aa11.48□□□□□ -0.57
NEK9-209ENST00000556170 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
NEK9-209ENST00000556170 NXT2Q9NPJ8 142 aaKnown RBP11.48□□□□□ -0.57
NEK9-209ENST00000556170 IGHV4-59P01825 116 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 TTC32Q5I0X7 151 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 A0A1W2PRX2 142 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 CCDC140Q96MF4 163 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 TRAV26-1A0A087WT03 109 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 SRSF9Q13242 221 aaKnown RBP eCLIP11.47□□□□□ -0.57
NEK9-209ENST00000556170 ADAMTSL5Q6ZMM2 481 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 ZNF747Q9BV97 191 aa11.47□□□□□ -0.57
NEK9-209ENST00000556170 A0A087WWL8 130 aa11.46□□□□□ -0.57
NEK9-209ENST00000556170 FAM223BA6NKX1 122 aa11.46□□□□□ -0.57
NEK9-209ENST00000556170 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.57
NEK9-209ENST00000556170 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
NEK9-209ENST00000556170 TAX1BP3O14907 124 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 DEFB125Q8N687 156 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.45□□□□□ -0.58
NEK9-209ENST00000556170 FASNP49327 2511 aaKnown RBP11.45□□□□□ -0.58
NEK9-209ENST00000556170 ETDBQ3ZM63 59 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 DAZ1Q9NQZ3 744 aaKnown RBP11.45□□□□□ -0.58
NEK9-209ENST00000556170 EMP1P54849 157 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 NEGR1Q7Z3B1 354 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 HIST1H4GQ99525 98 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 DKK2Q9UBU2 259 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 SMAD5-AS1Q9Y6J3 95 aa11.45□□□□□ -0.58
NEK9-209ENST00000556170 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
NEK9-209ENST00000556170 OVOL1O14753 267 aa11.44□□□□□ -0.58
NEK9-209ENST00000556170 ZC2HC1BQ5TFG8 222 aa11.44□□□□□ -0.58
NEK9-209ENST00000556170 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
NEK9-209ENST00000556170 USMG5Q96IX5 58 aa11.44□□□□□ -0.58
NEK9-209ENST00000556170 ATP5LO75964 103 aa11.44□□□□□ -0.58
NEK9-209ENST00000556170 ANXA2RQ3ZCQ2 193 aa11.44□□□□□ -0.58
NEK9-209ENST00000556170 GNRH2O43555 120 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 Q1RN00 199 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 DEFB112Q30KQ8 113 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 SS18L2Q9UHA2 77 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 TEX48A0A1B0GUV7 120 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 IGF1P05019 195 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 SRSF1Q07955 248 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEK9-209ENST00000556170 LINC00477Q96M19 166 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 SPINK8P0C7L1 97 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 CRYBA4P53673 196 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 C10orf105Q8TEF2 133 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 IGHV3-73A0A0B4J1V6 119 aa11.43□□□□□ -0.58
NEK9-209ENST00000556170 JMJD8Q96S16 334 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms