RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 UBE2D1P51668 147 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 EFNA4P52798 201 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 NDPQ00604 133 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 AMTNQ6UX39 209 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 DYNAPQ8N1N2 210 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 FAM110DQ8TAY7 271 aaPredicted RBP8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 PPDPFLQ8WWR9 84 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 ROS1P08922 2347 aa8.22□□□□□ -1.09
MTHFD1-210ENST00000555252 TLN1Q9Y490 2541 aaKnown RBP8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 TRBV20-1A0A075B6N2 111 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 IGHV7-81A0A0B4J1V7 117 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 GAS8-AS1O95177 125 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 ZFP36P26651 326 aaKnown RBP8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 UBE2D3P61077 147 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 UBE2D2P62837 147 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 Q8N9W7 124 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 SYT8Q8NBV8 401 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 TOMM6Q96B49 74 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 SMIM2Q9BVW6 85 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 SMAD5-AS1Q9Y6J3 95 aa8.21□□□□□ -1.1
MTHFD1-210ENST00000555252 TRAV26-1A0A087WT03 109 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 M0QXV9 152 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 CTSGP08311 255 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 ABCA1O95477 2261 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 PCNX1Q96RV3 2341 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 SPINK8P0C7L1 97 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 GATA1P15976 413 aaPredicted RBP8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 ATP5G2Q06055 141 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 SBSPONQ8IVN8 264 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 S4R3C0 116 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 ATRXP46100 2492 aa8.2□□□□□ -1.1
MTHFD1-210ENST00000555252 POLEQ07864 2286 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 IGKV3D-20A0A0C4DH25 116 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 TMEM262E9PQX1 116 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 TSPAN13O95857 204 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 INSL3P51460 131 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 TMEM78Q5T7P6 136 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 Q6ZUT4 128 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 PKD1L2Q7Z442 2459 aa8.19□□□□□ -1.1
MTHFD1-210ENST00000555252 CENPVL3A0A0U1RRI6 287 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 ERCC8Q13216 396 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 UBTD1Q9HAC8 227 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 M0R381 172 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 PPP1R17O96001 155 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 SCGB3A1Q96QR1 104 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 ERG28Q9UKR5 140 aa8.18□□□□□ -1.1
MTHFD1-210ENST00000555252 USP24Q9UPU5 2620 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 SPTA1P02549 2419 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 TRGV3P03979 118 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 C9orf47Q6ZRZ4 202 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 EPG5Q9HCE0 2579 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 A0A1W2PPR1 153 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 IGHV3-23P01764 117 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 COX6B1P14854 86 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 LMO4P61968 165 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 AJUBAQ96IF1 538 aa8.17□□□□□ -1.1
MTHFD1-210ENST00000555252 IGHV1-69DA0A0B4J2H0 117 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 ZNF815PA8K554 130 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 MED14OSP0DP75 135 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 HLA-DMBP28068 263 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 C15orf32Q32M92 178 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 SPANXN1Q5VSR9 72 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 PRADC1Q9BSG0 188 aa8.16□□□□□ -1.1
MTHFD1-210ENST00000555252 NPFFO15130 113 aa8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 BUB3O43684 328 aa8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 CD7P09564 240 aa8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 SAA4P35542 130 aa8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 HERVK_113P61574 105 aa8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 SUMO2P61956 95 aaKnown RBP8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 UFC1Q9Y3C8 167 aa8.15□□□□□ -1.1
MTHFD1-210ENST00000555252 ANKHD1Q8IWZ3 2542 aaKnown RBP8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 TRBV7-1A0A0A6YYK4 115 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 A8MWV9 139 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 ATP6V0E1O15342 81 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 ZNF688P0C7X2 276 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 PRB4P10163 310 aaPredicted RBP8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 PSMB2P49721 201 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 RPL32P62910 135 aaKnown RBP8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 ECSCRQ19T08 205 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 SCGB1D4Q6XE38 83 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 ITLN2Q8WWU7 325 aaPredicted RBP8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 BAALCQ8WXS3 180 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 C11orf21Q9P2W6 132 aa8.15□□□□□ -1.11
MTHFD1-210ENST00000555252 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms