RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 C2orf91Q6ZV80 131 aa9.17□□□□□ -0.94
XRCC3-208ENST00000554811 IGKCP01834 107 aa9.17□□□□□ -0.94
XRCC3-208ENST00000554811 C1orf122Q6ZSJ8 110 aa9.17□□□□□ -0.94
XRCC3-208ENST00000554811 MSRB2Q9Y3D2 182 aa9.17□□□□□ -0.94
XRCC3-208ENST00000554811 M0R1W7 72 aa9.16□□□□□ -0.94
XRCC3-208ENST00000554811 PAX8Q06710 450 aa9.16□□□□□ -0.94
XRCC3-208ENST00000554811 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
XRCC3-208ENST00000554811 OR10J6PQ8NGY7 276 aa9.16□□□□□ -0.94
XRCC3-208ENST00000554811 FN1P02751 2386 aaKnown RBP9.16□□□□□ -0.94
XRCC3-208ENST00000554811 BSNQ9UPA5 3926 aa9.16□□□□□ -0.94
XRCC3-208ENST00000554811 CRXO43186 299 aaPredicted RBP9.16□□□□□ -0.94
XRCC3-208ENST00000554811 C11orf21Q9P2W6 132 aa9.16□□□□□ -0.94
XRCC3-208ENST00000554811 UTP20O75691 2785 aaKnown RBP9.15□□□□□ -0.94
XRCC3-208ENST00000554811 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
XRCC3-208ENST00000554811 FXYD2P54710 66 aa9.15□□□□□ -0.94
XRCC3-208ENST00000554811 AMTNQ6UX39 209 aa9.15□□□□□ -0.94
XRCC3-208ENST00000554811 NPBQ8NG41 125 aa9.15□□□□□ -0.94
XRCC3-208ENST00000554811 DUX5Q96PT3 197 aa9.15□□□□□ -0.94
XRCC3-208ENST00000554811 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
XRCC3-208ENST00000554811 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.94
XRCC3-208ENST00000554811 BUB3O43684 328 aa9.15□□□□□ -0.94
XRCC3-208ENST00000554811 A0A087WWL8 130 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 IGKV3D-20A0A0C4DH25 116 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 NPFFO15130 113 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 DPM2O94777 84 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 HSD52Q0P140 79 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 PIP4P2Q8N4L2 257 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 RPL39LQ96EH5 51 aaKnown RBP9.15□□□□□ -0.95
XRCC3-208ENST00000554811 CHAC1Q9BUX1 264 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 CYSLTR1Q9Y271 337 aa9.15□□□□□ -0.95
XRCC3-208ENST00000554811 TRAV41A0A0B4J266 112 aa9.14□□□□□ -0.95
XRCC3-208ENST00000554811 H3BUX3 64 aa9.14□□□□□ -0.95
XRCC3-208ENST00000554811 SRSF9Q13242 221 aaKnown RBP eCLIP9.14□□□□□ -0.95
XRCC3-208ENST00000554811 UNQ9165/PRO28630Q6UXU0 137 aa9.14□□□□□ -0.95
XRCC3-208ENST00000554811 H7C2G1 150 aa9.14□□□□□ -0.95
XRCC3-208ENST00000554811 SEC11AP67812 179 aa9.14□□□□□ -0.95
XRCC3-208ENST00000554811 SAMD5Q5TGI4 173 aa9.14□□□□□ -0.95
XRCC3-208ENST00000554811 NXT2Q9NPJ8 142 aaKnown RBP9.14□□□□□ -0.95
XRCC3-208ENST00000554811 ZANQ9Y493 2812 aa9.14□□□□□ -0.95
XRCC3-208ENST00000554811 IGHV3-64A0A075B6Q5 118 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 GNRH2O43555 120 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 LGALS9BQ3B8N2 356 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 CD300EQ496F6 205 aaPredicted RBP9.13□□□□□ -0.95
XRCC3-208ENST00000554811 LGALS9CQ6DKI2 356 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 LINC00477Q96M19 166 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 CCDC140Q96MF4 163 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 ZNF256Q9Y2P7 627 aaPredicted RBP9.13□□□□□ -0.95
XRCC3-208ENST00000554811 ANKRD17O75179 2603 aaKnown RBP9.13□□□□□ -0.95
XRCC3-208ENST00000554811 A6NJY4 79 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 LY6G5BQ8NDX9 201 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 CSTL1Q9H114 145 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 GNLYP22749 145 aa9.13□□□□□ -0.95
XRCC3-208ENST00000554811 SRSF8Q9BRL6 282 aaKnown RBP9.13□□□□□ -0.95
XRCC3-208ENST00000554811 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.12□□□□□ -0.95
XRCC3-208ENST00000554811 OVOL3O00110 214 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 APOMO95445 188 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 NRGNQ92686 78 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 BLCAPP62952 87 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 LAGE3Q14657 143 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
XRCC3-208ENST00000554811 SLC50A1Q9BRV3 221 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 ATP5J2P56134 94 aa9.12□□□□□ -0.95
XRCC3-208ENST00000554811 ODF3BA8MYP8 253 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 SHISA2Q6UWI4 295 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 OR11H1Q8NG94 326 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 OR11H2Q8NH07 326 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 ITPR1Q14643 2758 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 C9orf118A6NHY6 69 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 NBL1P41271 181 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 RNF185Q96GF1 192 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 TRAV12-2A0A075B6T6 113 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 TRAV12-3A0A0B4J271 114 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 IGHG4P01861 327 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 PPBPP02775 128 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 MINOS1Q5TGZ0 78 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 JPT2Q9H910 190 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 MINOS1-NBL1R4GNA1 71 aa9.11□□□□□ -0.95
XRCC3-208ENST00000554811 ASIPP42127 132 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 UBE2E1P51965 193 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 ANXA2RQ3ZCQ2 193 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 PRR9Q5T870 116 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 OR4X2Q8NGF9 303 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 TRBV25-1A0A075B6N4 114 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 IGHV3-73A0A0B4J1V6 119 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 CD7P09564 240 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 IGHV4-38-2P0DP08 117 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 ZNF493Q6ZR52 646 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 OR9G4Q8NGQ1 327 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 DOPEY1Q5JWR5 2465 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
XRCC3-208ENST00000554811 C19orf84I3L1E1 186 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 IGLC6P0CF74 106 aa9.1□□□□□ -0.95
XRCC3-208ENST00000554811 EDN2P20800 178 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms