RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 HTN3P15516 51 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 PPT1P50897 306 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 TCL1AP56279 114 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 CST9LP1Q5W188 147 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 FAM159AQ6UWV7 190 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 PRNTQ86SH4 94 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 NDUFAF3Q9BU61 184 aa11.07□□□□□ -0.64
CHMP1A-206ENST00000549139 TRAV1-1A0A0B4J248 108 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 PAGE4O60829 102 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 ATP5G1P05496 136 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 ATP5G3P48201 142 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 MUC21Q5SSG8 566 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 C8orf49Q96NF6 230 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
CHMP1A-206ENST00000549139 TRAV34A0A0B4J273 112 aa11.05□□□□□ -0.64
CHMP1A-206ENST00000549139 P0DMU3 169 aa11.05□□□□□ -0.64
CHMP1A-206ENST00000549139 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
CHMP1A-206ENST00000549139 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
CHMP1A-206ENST00000549139 SMUG1Q53HV7 270 aa11.05□□□□□ -0.64
CHMP1A-206ENST00000549139 Q6ZR54 194 aa11.05□□□□□ -0.64
CHMP1A-206ENST00000549139 DNAH5Q8TE73 4624 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 TRGV11A0A075B6L2 103 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 A0A1B0GV50 99 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 GAGE12BA1L429 117 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 TEX46H3BTG2 121 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 SPINK4O60575 86 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 GAGE7O76087 117 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 GAGE12FP0CL80 117 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 GAGE12GP0CL81 117 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 GAGE12IP0CL82 117 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 KCNS1Q96KK3 526 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
CHMP1A-206ENST00000549139 DMBT1Q9UGM3 2413 aaPredicted RBP11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 F5H768 121 aa11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 GCGP01275 180 aa11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 ZNF80P51504 273 aaPredicted RBP11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 Q6ZTI0 123 aa11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 FMC1Q96HJ9 113 aa11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 MDFICQ9P1T7 246 aa11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 ZFP30Q9Y2G7 519 aa11.03□□□□□ -0.64
CHMP1A-206ENST00000549139 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 GNRH2O43555 120 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 CCL20P78556 96 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 TMEM88Q6PEY1 159 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 SPXQ9BT56 116 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 MANBALQ9NQG1 85 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 NAGKQ9UJ70 344 aa11.02□□□□□ -0.65
CHMP1A-206ENST00000549139 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
CHMP1A-206ENST00000549139 S100A9P06702 114 aaKnown RBP11.01□□□□□ -0.65
CHMP1A-206ENST00000549139 UBE2G1P62253 170 aa11.01□□□□□ -0.65
CHMP1A-206ENST00000549139 COX8CQ7Z4L0 72 aa11.01□□□□□ -0.65
CHMP1A-206ENST00000549139 Q86TA4 180 aa11.01□□□□□ -0.65
CHMP1A-206ENST00000549139 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
CHMP1A-206ENST00000549139 SDF2L1Q9HCN8 221 aa11.01□□□□□ -0.65
CHMP1A-206ENST00000549139 TRGV2A0A075B6R0 118 aa11□□□□□ -0.65
CHMP1A-206ENST00000549139 FABP5P3A8MUU1 101 aa11□□□□□ -0.65
CHMP1A-206ENST00000549139 CDK2AP2O75956 126 aa11□□□□□ -0.65
CHMP1A-206ENST00000549139 TYMSP04818 313 aa11□□□□□ -0.65
CHMP1A-206ENST00000549139 AKR1C3P42330 323 aa11□□□□□ -0.65
CHMP1A-206ENST00000549139 TXNDC17Q9BRA2 123 aa11□□□□□ -0.65
CHMP1A-206ENST00000549139 NACAE9PAV3 2078 aa11□□□□□ -0.65
CHMP1A-206ENST00000549139 IGHV3-16A0A0C4DH30 117 aa10.99□□□□□ -0.65
CHMP1A-206ENST00000549139 LTAP01374 205 aa10.99□□□□□ -0.65
CHMP1A-206ENST00000549139 NKX2-5P52952 324 aaPredicted RBP10.99□□□□□ -0.65
CHMP1A-206ENST00000549139 RASL10AQ92737 203 aa10.99□□□□□ -0.65
CHMP1A-206ENST00000549139 GNG13Q9P2W3 67 aa10.99□□□□□ -0.65
CHMP1A-206ENST00000549139 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
CHMP1A-206ENST00000549139 SCO2A0A1W2PP80 73 aa10.98□□□□□ -0.65
CHMP1A-206ENST00000549139 OR5I1Q13606 314 aa10.98□□□□□ -0.65
CHMP1A-206ENST00000549139 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
CHMP1A-206ENST00000549139 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
CHMP1A-206ENST00000549139 IGLV2-18A0A075B6J9 118 aa10.97□□□□□ -0.65
CHMP1A-206ENST00000549139 HOXA5P20719 270 aa10.97□□□□□ -0.65
CHMP1A-206ENST00000549139 CRIP1P50238 77 aa10.97□□□□□ -0.65
CHMP1A-206ENST00000549139 ALKAL2Q6UX46 152 aa10.97□□□□□ -0.65
CHMP1A-206ENST00000549139 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
CHMP1A-206ENST00000549139 H3BNG1 76 aa10.96□□□□□ -0.65
CHMP1A-206ENST00000549139 M0R2P5 195 aa10.96□□□□□ -0.65
CHMP1A-206ENST00000549139 IFNA1P01562 189 aa10.96□□□□□ -0.65
CHMP1A-206ENST00000549139 BLOC1S1P78537 153 aa10.96□□□□□ -0.65
CHMP1A-206ENST00000549139 ZC2HC1AQ96GY0 325 aa10.96□□□□□ -0.65
CHMP1A-206ENST00000549139 BOLA1Q9Y3E2 137 aa10.96□□□□□ -0.65
CHMP1A-206ENST00000549139 TRAV26-1A0A087WT03 109 aa10.95□□□□□ -0.66
CHMP1A-206ENST00000549139 TAGLN2P37802 199 aaKnown RBP10.95□□□□□ -0.66
CHMP1A-206ENST00000549139 ZNF674Q2M3X9 581 aa10.95□□□□□ -0.66
CHMP1A-206ENST00000549139 SOHLH1Q5JUK2 328 aa10.95□□□□□ -0.66
CHMP1A-206ENST00000549139 C11orf52Q96A22 123 aa10.95□□□□□ -0.66
CHMP1A-206ENST00000549139 NUDT3O95989 172 aa10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 MEF2BQ02080 365 aaPredicted RBP10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 SLAQ13239 276 aa10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 RNF212Q495C1 297 aa10.94□□□□□ -0.66
CHMP1A-206ENST00000549139 FAM162BQ5T6X4 162 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms