RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SCGB1A1P11684 91 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 INSL3P51460 131 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 LCNL1Q6ZST4 164 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 IGHV3-49A0A0A0MS15 119 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 IGHV7-81A0A0B4J1V7 117 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 RBAKDNA6NC62 111 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 KLK15Q9H2R5 256 aa10.53□□□□□ -0.72
HDAC7-228ENST00000548938 ASH1LQ9NR48 2969 aaKnown RBP10.53□□□□□ -0.72
HDAC7-228ENST00000548938 C15orf32Q32M92 178 aa10.52□□□□□ -0.72
HDAC7-228ENST00000548938 GAGE13Q4V321 117 aa10.52□□□□□ -0.72
HDAC7-228ENST00000548938 Q8N6K4 173 aa10.52□□□□□ -0.72
HDAC7-228ENST00000548938 SPATA25Q9BR10 227 aa10.52□□□□□ -0.72
HDAC7-228ENST00000548938 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.73
HDAC7-228ENST00000548938 CCDC144NLQ6NUI1 221 aa10.52□□□□□ -0.73
HDAC7-228ENST00000548938 SPTBN1Q01082 2364 aaKnown RBP10.51□□□□□ -0.73
HDAC7-228ENST00000548938 TRAV8-2A0A0B4J237 113 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 F8VRH5 84 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 SCGB2A2Q13296 93 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 CLPSL1A2RUU4 121 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 H3BVH4 76 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 CLEC3BP05452 202 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 PRTN3P24158 256 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 TMEM78Q5T7P6 136 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 ZNF502Q8TBZ5 544 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 CYSLTR1Q9Y271 337 aa10.51□□□□□ -0.73
HDAC7-228ENST00000548938 HIVEP3Q5T1R4 2406 aa10.5□□□□□ -0.73
HDAC7-228ENST00000548938 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
HDAC7-228ENST00000548938 H7C1H1 209 aa10.5□□□□□ -0.73
HDAC7-228ENST00000548938 ECSCRQ19T08 205 aa10.5□□□□□ -0.73
HDAC7-228ENST00000548938 VMO1Q7Z5L0 202 aa10.5□□□□□ -0.73
HDAC7-228ENST00000548938 SMIM2Q9BVW6 85 aa10.5□□□□□ -0.73
HDAC7-228ENST00000548938 A0A1B0GWB2 263 aa10.5□□□□□ -0.73
HDAC7-228ENST00000548938 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
HDAC7-228ENST00000548938 M0R1W7 72 aa10.49□□□□□ -0.73
HDAC7-228ENST00000548938 SPRY2O43597 315 aa10.49□□□□□ -0.73
HDAC7-228ENST00000548938 ATP5G2Q06055 141 aa10.49□□□□□ -0.73
HDAC7-228ENST00000548938 TRAV12-1A0A0B4J245 112 aa10.49□□□□□ -0.73
HDAC7-228ENST00000548938 PRR9Q5T870 116 aa10.49□□□□□ -0.73
HDAC7-228ENST00000548938 HRNRQ86YZ3 2850 aaPredicted RBP10.49□□□□□ -0.73
HDAC7-228ENST00000548938 C8orf86Q6ZUL3 223 aa10.49□□□□□ -0.73
HDAC7-228ENST00000548938 SCGB3A1Q96QR1 104 aa10.49□□□□□ -0.73
HDAC7-228ENST00000548938 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
HDAC7-228ENST00000548938 RAB9AP51151 201 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 Q8N9W7 124 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 CCDC140Q96MF4 163 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 PGPEP1Q9NXJ5 209 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 ACACBO00763 2458 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 CLEC19AQ6UXS0 136 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
HDAC7-228ENST00000548938 LINC01619G3V211 115 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 J3KRW8 73 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 FAM110DQ8TAY7 271 aaPredicted RBP10.47□□□□□ -0.73
HDAC7-228ENST00000548938 MRAP2Q96G30 205 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 MED13LQ71F56 2210 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 A0A1B0GV72 72 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 IGF1P05019 195 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 EBI3Q14213 229 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 NEXN-AS1Q8NBZ9 246 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
HDAC7-228ENST00000548938 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
HDAC7-228ENST00000548938 M0R381 172 aa10.46□□□□□ -0.73
HDAC7-228ENST00000548938 ATP6V0E1O15342 81 aa10.46□□□□□ -0.73
HDAC7-228ENST00000548938 APOMO95445 188 aa10.46□□□□□ -0.73
HDAC7-228ENST00000548938 TOMM6Q96B49 74 aa10.46□□□□□ -0.73
HDAC7-228ENST00000548938 PRADC1Q9BSG0 188 aa10.46□□□□□ -0.73
HDAC7-228ENST00000548938 HOXA3O43365 443 aaPredicted RBP10.46□□□□□ -0.74
HDAC7-228ENST00000548938 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.74
HDAC7-228ENST00000548938 SFTA2Q6UW10 78 aa10.46□□□□□ -0.74
HDAC7-228ENST00000548938 C9orf47Q6ZRZ4 202 aa10.46□□□□□ -0.74
HDAC7-228ENST00000548938 RASL10AQ92737 203 aa10.46□□□□□ -0.74
HDAC7-228ENST00000548938 TIMD4Q96H15 378 aa10.46□□□□□ -0.74
HDAC7-228ENST00000548938 MRPL16Q9NX20 251 aaKnown RBP10.46□□□□□ -0.74
HDAC7-228ENST00000548938 ORMDL2Q53FV1 153 aa10.45□□□□□ -0.74
HDAC7-228ENST00000548938 G3V318 75 aa10.45□□□□□ -0.74
HDAC7-228ENST00000548938 BAALCQ8WXS3 180 aa10.45□□□□□ -0.74
HDAC7-228ENST00000548938 PLEKHB2Q96CS7 222 aa10.45□□□□□ -0.74
HDAC7-228ENST00000548938 ZNF815PA8K554 130 aa10.44□□□□□ -0.74
HDAC7-228ENST00000548938 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
HDAC7-228ENST00000548938 LINC01549A6NIU2 74 aa10.44□□□□□ -0.74
HDAC7-228ENST00000548938 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
HDAC7-228ENST00000548938 MRPL53Q96EL3 112 aaKnown RBP10.44□□□□□ -0.74
HDAC7-228ENST00000548938 METTL26Q96S19 204 aa10.44□□□□□ -0.74
HDAC7-228ENST00000548938 LINC01548A6NM66 108 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 SLC25A16P16260 332 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 CFAP126Q5VTH2 177 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 C14orf178Q8N769 122 aaPredicted RBP10.43□□□□□ -0.74
HDAC7-228ENST00000548938 C1QTNF4Q9BXJ3 329 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 HIF1ANQ9NWT6 349 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 PRSS29PA6NIE9 313 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 OOSP1A8MZH6 123 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 FOXI1Q12951 378 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms