RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	FAM186A	A6NE01	2351 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	TRAV17	A0A0B4J275	112 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	OOSP1	A8MZH6	123 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	TMEM178B	H3BS89	294 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	BUB1B-PAK6	H3BSN5	160 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	CCDC179	H3BU77	68 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120		M0R1B8	84 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	VCY	O14598	125 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	LEPROT	O15243	131 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	IGHV1-69	P01742	117 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	DLX1	P56177	255 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	FAM159A	Q6UWV7	190 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	VPREB3	Q9UKI3	123 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	USP34	Q70CQ2	3546 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	MED12	Q93074	2177 aa		7.84	□□□□□ -1.15
UBC-213	ENST00000546120	IGLV11-55	A0A075B6I3	123 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.83	□□□□□ -1.16
UBC-213	ENST00000546120	C17orf100	A8MU93	164 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120		J3QQQ9	107 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	IGKV2D-40	P01614	121 aa	Predicted RBP	7.83	□□□□□ -1.16
UBC-213	ENST00000546120	ZNF80	P51504	273 aa	Predicted RBP	7.83	□□□□□ -1.16
UBC-213	ENST00000546120	HES3	Q5TGS1	186 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	LINC00643	Q86TS7	51 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	ZNF575	Q86XF7	245 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	DEFB108B	Q8NET1	73 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	NTN5	Q8WTR8	489 aa	Predicted RBP	7.83	□□□□□ -1.16
UBC-213	ENST00000546120	TMEM263	Q8WUH6	116 aa	Known RBP	7.83	□□□□□ -1.16
UBC-213	ENST00000546120	LINC00526	Q96FQ7	95 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	LINC00477	Q96M19	166 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	ODF3	Q96PU9	254 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	MSRB1	Q9NZV6	116 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	WDR87	Q6ZQQ6	2873 aa		7.83	□□□□□ -1.16
UBC-213	ENST00000546120	SDK1	Q7Z5N4	2213 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120		A0A0J9YXY3	114 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	CACNA1D	Q01668	2161 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	IGFL2	Q6UWQ7	119 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	TMEM219	Q86XT9	240 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	C3orf22	Q8N5N4	141 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	C9orf106	Q8NAJ2	232 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	KIR2DL4	Q99706	377 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	MYO15A	Q9UKN7	3530 aa		7.82	□□□□□ -1.16
UBC-213	ENST00000546120	DMD	P11532	3685 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	TRAV21	A0A0B4J279	112 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	IGKV3D-20	A0A0C4DH25	116 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	IGHV7-4-1	A0A0J9YVY3	117 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	NBR2	O15453	112 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	CCL3L1	P16619	93 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	LOX	P28300	417 aa	Predicted RBP	7.81	□□□□□ -1.16
UBC-213	ENST00000546120	EBI3	Q14213	229 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	RHOH	Q15669	191 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	C2orf82	Q6UX34	121 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	GFRAL	Q6UXV0	394 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	PPDPF	Q9H3Y8	114 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	TPSG1	Q9NRR2	321 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	ZNF256	Q9Y2P7	627 aa	Predicted RBP	7.81	□□□□□ -1.16
UBC-213	ENST00000546120	EP300	Q09472	2414 aa	Predicted RBP	7.81	□□□□□ -1.16
UBC-213	ENST00000546120	PCSK5	Q92824	1860 aa		7.81	□□□□□ -1.16
UBC-213	ENST00000546120	TRBV6-5	A0A0K0K1A5	114 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	IGIP	A6NJ69	53 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	CRLF1	O75462	422 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	NDUFA7	O95182	113 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	EFNA4	P52798	201 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	FOXC1	Q12948	553 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	ZNF876P	Q49A33	203 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	DYNLRB1	Q9NP97	96 aa		7.8	□□□□□ -1.16
UBC-213	ENST00000546120	ASCC3	Q8N3C0	2202 aa	Known RBP	7.79	□□□□□ -1.16
UBC-213	ENST00000546120	ASXL3	Q9C0F0	2248 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	CFAP54	Q96N23	3096 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	LY6L	H3BQJ8	138 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	CDX4	O14627	284 aa	Predicted RBP	7.79	□□□□□ -1.16
UBC-213	ENST00000546120	OVOL1	O14753	267 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	TIMM17B	O60830	172 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	NXPH4	O95158	308 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	MSMP	Q1L6U9	139 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	RUSC1-AS1	Q66K80	236 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	CFHR4	Q92496	578 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	LINC01587	Q99440	93 aa		7.79	□□□□□ -1.16
UBC-213	ENST00000546120	SPTBN4	Q9H254	2564 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	OTOGL	Q3ZCN5	2332 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	FRYL	O94915	3013 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120		A4D1N5	150 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	ATOX1	O00244	68 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	CRYGA	P11844	174 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	LPAL2	Q16609	132 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120		Q1RN00	199 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	DUX4L9	Q6RFH8	374 aa	Predicted RBP	7.78	□□□□□ -1.16
UBC-213	ENST00000546120	C9orf139	Q6ZV77	190 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	ZNRF2	Q8NHG8	242 aa		7.78	□□□□□ -1.16
UBC-213	ENST00000546120	ZNF292	O60281	2723 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	DIDO1	Q9BTC0	2240 aa	Known RBP	7.77	□□□□□ -1.17
UBC-213	ENST00000546120	IGLV4-69	A0A075B6H9	119 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	IGHV3-21	A0A0B4J1V1	117 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	BUB3	O43684	328 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	INAFM2	P0DMQ5	153 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	GATA1	P15976	413 aa	Predicted RBP	7.77	□□□□□ -1.17
UBC-213	ENST00000546120	C9orf153	Q5TBE3	101 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	SDIM1	Q6ZPB5	146 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	DYNAP	Q8N1N2	210 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	FANCD2OS	Q96PS1	177 aa		7.77	□□□□□ -1.17
UBC-213	ENST00000546120	AGPAT4-IT1	Q9H0P7	198 aa		7.77	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms