RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GATCO43716 136 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 MED14OSP0DP75 135 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 OR5I1Q13606 314 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 NUDT10Q8NFP7 164 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 NUDT11Q96G61 164 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 RCHY1Q96PM5 261 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 GFRA4Q9GZZ7 299 aa11.67□□□□□ -0.54
PRPF40A-212ENST00000545856 TMEM189A5PLL7 270 aa11.66□□□□□ -0.54
PRPF40A-212ENST00000545856 J3KRW8 73 aa11.66□□□□□ -0.54
PRPF40A-212ENST00000545856 ORM1P02763 201 aa11.66□□□□□ -0.54
PRPF40A-212ENST00000545856 FXYD7P58549 80 aa11.66□□□□□ -0.54
PRPF40A-212ENST00000545856 C1orf158Q8N1D5 194 aa11.66□□□□□ -0.54
PRPF40A-212ENST00000545856 RNF183Q96D59 192 aa11.66□□□□□ -0.54
PRPF40A-212ENST00000545856 A0A1W2PPQ1 181 aa11.65□□□□□ -0.55
PRPF40A-212ENST00000545856 ZNF705GA8MUZ8 300 aaPredicted RBP11.65□□□□□ -0.55
PRPF40A-212ENST00000545856 ATP6V1G1O75348 118 aa11.65□□□□□ -0.55
PRPF40A-212ENST00000545856 KIR3DS1Q14943 382 aa11.65□□□□□ -0.55
PRPF40A-212ENST00000545856 IMMP2LQ96T52 175 aa11.65□□□□□ -0.55
PRPF40A-212ENST00000545856 LINC01587Q99440 93 aa11.65□□□□□ -0.55
PRPF40A-212ENST00000545856 RNASE7Q9H1E1 156 aaKnown RBP11.65□□□□□ -0.55
PRPF40A-212ENST00000545856 NBEAL2Q6ZNJ1 2754 aa11.64□□□□□ -0.55
PRPF40A-212ENST00000545856 MEGF8Q7Z7M0 2845 aa11.64□□□□□ -0.55
PRPF40A-212ENST00000545856 OR2D3Q8NGH3 330 aa11.64□□□□□ -0.55
PRPF40A-212ENST00000545856 TMEM263Q8WUH6 116 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-212ENST00000545856 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
PRPF40A-212ENST00000545856 NDUFAF3Q9BU61 184 aa11.64□□□□□ -0.55
PRPF40A-212ENST00000545856 IGKV3D-20A0A0C4DH25 116 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 CXorf65A6NEN9 183 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 MIFP14174 115 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 FOXA3P55318 350 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 RBMY1FQ15415 496 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 RNF212Q495C1 297 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 C16orf74Q96GX8 76 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 V9GYV3 84 aa11.63□□□□□ -0.55
PRPF40A-212ENST00000545856 C7orf77A4D0Y5 90 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 SPRY2O43597 315 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 ASIPP42127 132 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 RRN3P1Q2M238 152 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 DEFB135Q30KP9 77 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 PIK3CD-AS1Q5SR53 167 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 BTF3L4Q96K17 158 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 B9D2Q9BPU9 175 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 IL36BQ9NZH7 164 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 C11orf21Q9P2W6 132 aa11.62□□□□□ -0.55
PRPF40A-212ENST00000545856 TRAV9-1A0A075B6T8 112 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 CBY3A6NI87 242 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 F2Z2F3 143 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 OR5AL1P0C617 328 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 RPL19P84098 196 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 ZNF415Q09FC8 603 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 PTH2Q96A98 100 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 TM2D3Q9BRN9 247 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 SPXQ9BT56 116 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 NAGKQ9UJ70 344 aa11.61□□□□□ -0.55
PRPF40A-212ENST00000545856 TYMSP04818 313 aa11.6□□□□□ -0.55
PRPF40A-212ENST00000545856 WDR73Q6P4I2 378 aa11.6□□□□□ -0.55
PRPF40A-212ENST00000545856 RNASE8Q8TDE3 154 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-212ENST00000545856 SSBP4Q9BWG4 385 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-212ENST00000545856 TEX48A0A1B0GUV7 120 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 SMIM27A0A1W2PRY6 76 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 SNAI2O43623 268 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 PRB2P02812 416 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 IGLC6P0CF74 106 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 NHLRC4P0CG21 123 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 S100A4P26447 101 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 MUC21Q5SSG8 566 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 KCNIP4Q6PIL6 250 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 NAT8BQ9UHF3 227 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 X6R8D5 127 aa11.59□□□□□ -0.55
PRPF40A-212ENST00000545856 IGHV3-16A0A0C4DH30 117 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 CTRLP40313 264 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 TCL1AP56279 114 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 OR11H2Q8NH07 326 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 CNFNQ9BYD5 112 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 ZMAT4Q9H898 229 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 SCRT2Q9NQ03 307 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 RPS10P5Q9NQ39 176 aa11.58□□□□□ -0.56
PRPF40A-212ENST00000545856 A0A1B0GW15 77 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 S100PP25815 95 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 CACNG7P62955 275 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 DAZ2Q13117 558 aaKnown RBP11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 FER1L6-AS1Q8NA97 138 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 BORCS7Q96B45 105 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 C9orf85Q96MD7 179 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 OVOL2Q9BRP0 275 aa11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 C11orf68Q9H3H3 251 aaKnown RBP11.57□□□□□ -0.56
PRPF40A-212ENST00000545856 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
PRPF40A-212ENST00000545856 DEFA6Q01524 100 aa11.56□□□□□ -0.56
PRPF40A-212ENST00000545856 LGALS9BQ3B8N2 356 aa11.56□□□□□ -0.56
PRPF40A-212ENST00000545856 Q6ZQT7 251 aa11.56□□□□□ -0.56
PRPF40A-212ENST00000545856 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
PRPF40A-212ENST00000545856 SBSPONQ8IVN8 264 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms