RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 HELZ2Q9BYK8 2649 aaKnown RBP4.14□□□□□ -1.75
KDM3B-209ENST00000542866 CRYGBP07316 175 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 ERCC8Q13216 396 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 HES1Q14469 280 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 TMEM155Q4W5P6 130 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 PVRIGQ6DKI7 326 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 RNF185Q96GF1 192 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 PIMREGQ9BSJ6 248 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 KLK15Q9H2R5 256 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 NXT2Q9NPJ8 142 aaKnown RBP4.14□□□□□ -1.75
KDM3B-209ENST00000542866 UFC1Q9Y3C8 167 aa4.14□□□□□ -1.75
KDM3B-209ENST00000542866 MAP1AP78559 2803 aaPredicted RBP4.14□□□□□ -1.75
KDM3B-209ENST00000542866 MALRD1Q5VYJ5 2156 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 ACANP16112 2415 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 TNFRSF13BO14836 293 aaPredicted RBP4.13□□□□□ -1.75
KDM3B-209ENST00000542866 ATP5LO75964 103 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 C5orf47Q569G3 176 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 TM2D2Q9BX73 214 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 TRAV26-2A0A0B4J265 109 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 NCBP2LA6PVI3 153 aaKnown RBP4.13□□□□□ -1.75
KDM3B-209ENST00000542866 LYNX1G3V0Z9 82 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 BUB1B-PAK6H3BSN5 160 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 LYNX1P0DP58 116 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 MRAP2Q96G30 205 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 C20orf78Q9BR46 151 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 CYSLTR1Q9Y271 337 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 FABP5P3A8MUU1 101 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 MRPS12O15235 138 aaKnown RBP4.13□□□□□ -1.75
KDM3B-209ENST00000542866 APOMO95445 188 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 EFNA4P52798 201 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 DLX6P56179 175 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 DTX2Q86UW9 622 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 ZMAT4Q9H898 229 aa4.13□□□□□ -1.75
KDM3B-209ENST00000542866 AGRNO00468 2067 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 DMXL2Q8TDJ6 3036 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 LOC107984156A0A0G2JMH3 177 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 C19orf84I3L1E1 186 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 SCGB2A1O75556 95 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 IGLC6P0CF74 106 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 RPL7P18124 248 aaKnown RBP4.12□□□□□ -1.75
KDM3B-209ENST00000542866 MFAP4P55083 255 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 PSMG4Q5JS54 123 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 ARL17AQ8IVW1 177 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 C8orf31Q8N9H6 132 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 IGHV3OR16-13A0A075B7E8 117 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 IGHV3-74A0A0B4J1X5 117 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 SHISA9B4DS77 424 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 TIMM23O14925 209 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 HOXA3O43365 443 aaPredicted RBP4.12□□□□□ -1.75
KDM3B-209ENST00000542866 PDE6HQ13956 83 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 CDSNQ15517 529 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 RRN3P1Q2M238 152 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 PIFOQ8TCI5 191 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 ZNF418Q8TF45 676 aaPredicted RBP4.12□□□□□ -1.75
KDM3B-209ENST00000542866 SPATA25Q9BR10 227 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 IGHV3-66A0A0C4DH42 116 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 TRGV3P03979 118 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 PSMB2P49721 201 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 LAGE3Q14657 143 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 Q8N8P6 123 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 SYT8Q8NBV8 401 aa4.12□□□□□ -1.75
KDM3B-209ENST00000542866 MRPL16Q9NX20 251 aaKnown RBP4.12□□□□□ -1.75
KDM3B-209ENST00000542866 COL12A1Q99715 3063 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 IGLV1-47P01700 117 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 RNF182Q8N6D2 247 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 SMG1Q96Q15 3661 aaKnown RBP4.11□□□□□ -1.75
KDM3B-209ENST00000542866 IGSF10Q6WRI0 2623 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 SRSF1Q07955 248 aaKnown RBP eCLIP4.11□□□□□ -1.75
KDM3B-209ENST00000542866 SRSF9Q13242 221 aaKnown RBP eCLIP4.11□□□□□ -1.75
KDM3B-209ENST00000542866 SPANXN1Q5VSR9 72 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 SCGB1D4Q6XE38 83 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 IL17RELQ6ZVW7 336 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 DYNAPQ8N1N2 210 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 ZNF502Q8TBZ5 544 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 C21orf62Q9NYP8 219 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 VPREB3Q9UKI3 123 aa4.11□□□□□ -1.75
KDM3B-209ENST00000542866 A0A087WX48 190 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 NBR2O15453 112 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 LY6HO94772 140 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 TAL2Q16559 108 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 RAX2Q96IS3 184 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 IGHV3-49A0A0A0MS15 119 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 SPRY2O43597 315 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 PTH2Q96A98 100 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 BOD1L1Q8NFC6 3051 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 MYMXA0A1B0GTQ4 84 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 H3BVH4 76 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 DSCR9P59020 149 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 FOXI1Q12951 378 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 DEFB104AQ8WTQ1 72 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 RNF183Q96D59 192 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 SCGB3A1Q96QR1 104 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 PPDPFQ9H3Y8 114 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 SMAD5-AS1Q9Y6J3 95 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 ITPR3Q14573 2671 aa4.1□□□□□ -1.75
KDM3B-209ENST00000542866 H7C1H1 209 aa4.09□□□□□ -1.75
KDM3B-209ENST00000542866 MT-ATP8P03928 68 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms