RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 ZNF580Q9UK33 172 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 SVEP1Q4LDE5 3571 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 TRAV21A0A0B4J279 112 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 H3BVH4 76 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 TAX1BP3O14907 124 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 AVPP01185 164 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 GATA3P23771 443 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 DSCR9P59020 149 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
PRKAB1-206ENST00000541640 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 WFDC3Q8IUB2 231 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 APRG1Q8IVJ8 170 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 C18orf15Q96N68 181 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 RHPN1-AS1Q9BWJ2 59 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 DKK2Q9UBU2 259 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 PLA2G2AP14555 144 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 PSMG4Q5JS54 123 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 DAZ1Q9NQZ3 744 aaKnown RBP10.04□□□□□ -0.8
PRKAB1-206ENST00000541640 CD5LO43866 347 aa10.03□□□□□ -0.8
PRKAB1-206ENST00000541640 ODF1Q14990 250 aa10.03□□□□□ -0.8
PRKAB1-206ENST00000541640 LCNL1Q6ZST4 164 aa10.03□□□□□ -0.8
PRKAB1-206ENST00000541640 COL12A1Q99715 3063 aa10.03□□□□□ -0.8
PRKAB1-206ENST00000541640 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 K7EMT4 169 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 K7EP13 123 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 SIVA1O15304 175 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 MED14OSP0DP75 135 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 TM4SF20Q53R12 229 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 OR9G4Q8NGQ1 327 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 LRRK2Q5S007 2527 aa10.02□□□□□ -0.8
PRKAB1-206ENST00000541640 J3KRW8 73 aa10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 LAGE3Q14657 143 aa10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 TMEM97Q5BJF2 176 aa10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 ERASQ7Z444 233 aa10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 PEF1Q9UBV8 284 aaKnown RBP10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 SMPXQ9UHP9 88 aa10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 UTP20O75691 2785 aaKnown RBP10.02□□□□□ -0.81
PRKAB1-206ENST00000541640 J3QKU1 62 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 ATP5LO75964 103 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 COX6B1P14854 86 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 SLC25A16P16260 332 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 ASIPP42127 132 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 DEFB1P60022 68 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 SMIM17P0DL12 118 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 SEC11AP67812 179 aa10.01□□□□□ -0.81
PRKAB1-206ENST00000541640 F6UB75 175 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 PRSS1P07477 247 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 ANXA2RQ3ZCQ2 193 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 HHLA3Q9XRX5 114 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 S100A4P26447 101 aaKnown RBP10□□□□□ -0.81
PRKAB1-206ENST00000541640 PSMB8P28062 276 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
PRKAB1-206ENST00000541640 CDKN1BP46527 198 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 ZFHX3Q15911 3703 aa10□□□□□ -0.81
PRKAB1-206ENST00000541640 IGKCP01834 107 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 KIR3DS1Q14943 382 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 SAMD13Q5VXD3 122 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 LINC01356Q8N9X3 169 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 FOXC2Q99958 501 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 SMIM2Q9BVW6 85 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 IGKV3-7A0A075B6H7 116 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 M0R381 172 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 VAMP3Q15836 100 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 DEFB112Q30KQ8 113 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 MYOZ3Q8TDC0 251 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 NRGNQ92686 78 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 PHLDA3Q9Y5J5 127 aa9.99□□□□□ -0.81
PRKAB1-206ENST00000541640 TMEM89A2RUT3 159 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 ID1P41134 155 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 NMUP48645 174 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 HSD52Q0P140 79 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 TMEM95Q3KNT9 176 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 ADAMTSL5Q6ZMM2 481 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 A0A096LNT2 108 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 KLLNB2CW77 178 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 DPM2O94777 84 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 IGHV4-59P01825 116 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 TCTAP57738 103 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 DCANP1Q8TF63 244 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 C20orf78Q9BR46 151 aa9.98□□□□□ -0.81
PRKAB1-206ENST00000541640 CBY3A6NI87 242 aa9.97□□□□□ -0.81
PRKAB1-206ENST00000541640 J3QLI3 93 aa9.97□□□□□ -0.81
PRKAB1-206ENST00000541640 RNASE3P12724 160 aaKnown RBP9.97□□□□□ -0.81
PRKAB1-206ENST00000541640 EDN2P20800 178 aa9.97□□□□□ -0.81
PRKAB1-206ENST00000541640 OR4C5Q8NGB2 326 aa9.97□□□□□ -0.81
PRKAB1-206ENST00000541640 RASL10AQ92737 203 aa9.97□□□□□ -0.81
PRKAB1-206ENST00000541640 K7EMI3 77 aa9.96□□□□□ -0.81
PRKAB1-206ENST00000541640 GNRH2O43555 120 aa9.96□□□□□ -0.81
PRKAB1-206ENST00000541640 NXPH4O95158 308 aa9.96□□□□□ -0.81
PRKAB1-206ENST00000541640 SUMO2P61956 95 aaKnown RBP9.96□□□□□ -0.81
PRKAB1-206ENST00000541640 RNF151Q2KHN1 245 aa9.96□□□□□ -0.81
PRKAB1-206ENST00000541640 C14orf178Q8N769 122 aaPredicted RBP9.96□□□□□ -0.81
PRKAB1-206ENST00000541640 SPRY2O43597 315 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms