RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ATP6V0BQ99437 205 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 TPPP3Q9BW30 176 aa8.09□□□□□ -1.11
CHFR-219ENST00000541341 LOC389332A0A1B0GUA5 103 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 B4DSR2 109 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 IGKV1-17P01599 117 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 IGLV1-47P01700 117 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 IL4P05112 153 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 CCL3L1P16619 93 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 GAGE13Q4V321 117 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 C10orf55Q5SWW7 151 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 NPBQ8NG41 125 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 OR11H6Q8NGC7 330 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 TIMD4Q96H15 378 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 ZNF479Q96JC4 524 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 SGK494Q96LW2 274 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 MRPL36Q9P0J6 103 aaKnown RBP8.08□□□□□ -1.12
CHFR-219ENST00000541341 LENEPQ9Y5L5 61 aa8.08□□□□□ -1.12
CHFR-219ENST00000541341 A0A096LNJ9 63 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 TRAV8-1A0A0A6YYK1 113 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 A0A1W2PRD5 423 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 A0A1W2PRF3 423 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 A0A1W2PRM7 423 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 TMEM262E9PQX1 116 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 MRPS12O15235 138 aaKnown RBP8.07□□□□□ -1.12
CHFR-219ENST00000541341 MSMBP08118 114 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 LEPP41159 167 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 LAGE3Q14657 143 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 ODF1Q14990 250 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 FAM201AQ5SY85 155 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 SVIPQ8NHG7 77 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 ZNF418Q8TF45 676 aaPredicted RBP8.07□□□□□ -1.12
CHFR-219ENST00000541341 DUX5Q96PT3 197 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
CHFR-219ENST00000541341 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 TRBV25-1A0A075B6N4 114 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 A0A087WX48 190 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 PPIAL4CA0A0B4J2A2 164 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.06□□□□□ -1.12
CHFR-219ENST00000541341 H7C1H1 209 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 NBR2O15453 112 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 SAP30O75446 220 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 NCR2O95944 276 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 PPIAL4GP0DN37 164 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 MRGPRG-AS1Q2M3A8 158 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 RAB37Q96AX2 223 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 CYSLTR1Q9Y271 337 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 TNCP24821 2201 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 MEGF8Q7Z7M0 2845 aa8.06□□□□□ -1.12
CHFR-219ENST00000541341 IGHV4-4A0A075B6R2 117 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 OR11H12B2RN74 326 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 IGLL5B9A064 214 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 H3BMG7 143 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 K7EIM0 57 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 NDUFA3O95167 84 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 NPYP01303 97 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 CRIP1P50238 77 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 LMO4P61968 165 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 UTF1Q5T230 341 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 OR11H1Q8NG94 326 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 OR11H2Q8NH07 326 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 JMJD8Q96S16 334 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 SPANXDQ9BXN6 97 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 ESM1Q9NQ30 184 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 HHLA3Q9XRX5 114 aa8.05□□□□□ -1.12
CHFR-219ENST00000541341 HOXA3O43365 443 aaPredicted RBP8.04□□□□□ -1.12
CHFR-219ENST00000541341 FCN3O75636 299 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 IGHV3-48P01763 117 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 ORM1P02763 201 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 AZU1P20160 251 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 HERVK_113P61574 105 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 SCGB2A2Q13296 93 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 DUX4L9Q6RFH8 374 aaPredicted RBP8.04□□□□□ -1.12
CHFR-219ENST00000541341 SPANXB1Q9NS25 103 aaPredicted RBP8.04□□□□□ -1.12
CHFR-219ENST00000541341 MRPL16Q9NX20 251 aaKnown RBP8.04□□□□□ -1.12
CHFR-219ENST00000541341 DPM3Q9P2X0 92 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 CTSZQ9UBR2 303 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 HILPDAQ9Y5L2 63 aa8.04□□□□□ -1.12
CHFR-219ENST00000541341 TEX48A0A1B0GUV7 120 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 TMEM89A2RUT3 159 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 F8VRH5 84 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 M0QXV9 152 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 M0R1W7 72 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 SNAI2O43623 268 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 MED14OSP0DP75 135 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 CD24P25063 80 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 HILS1P60008 231 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 RRN3P1Q2M238 152 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 C12orf74Q32Q52 190 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 LYPD2Q6UXB3 125 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 C1orf122Q6ZSJ8 110 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 LHFPL4Q7Z7J7 247 aa8.03□□□□□ -1.12
CHFR-219ENST00000541341 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms