RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RPL7P18124 248 aaKnown RBP9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 COX8CQ7Z4L0 72 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 ZFAND3Q9H8U3 227 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 SORL1Q92673 2214 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 CREBBPQ92793 2442 aa9.65□□□□□ -0.87
SFSWAP-208ENST00000539506 CLPSL1A2RUU4 121 aa9.65□□□□□ -0.87
SFSWAP-208ENST00000539506 UBE2E1P51965 193 aa9.65□□□□□ -0.87
SFSWAP-208ENST00000539506 CCDC140Q96MF4 163 aa9.65□□□□□ -0.87
SFSWAP-208ENST00000539506 LINC00527Q9UJ94 153 aa9.65□□□□□ -0.87
SFSWAP-208ENST00000539506 IGF1P05019 195 aa9.64□□□□□ -0.87
SFSWAP-208ENST00000539506 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
SFSWAP-208ENST00000539506 Q6AWC8 147 aa9.64□□□□□ -0.87
SFSWAP-208ENST00000539506 ZNF479Q96JC4 524 aa9.64□□□□□ -0.87
SFSWAP-208ENST00000539506 A0A1B0GW15 77 aa9.63□□□□□ -0.87
SFSWAP-208ENST00000539506 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
SFSWAP-208ENST00000539506 ABCA2Q9BZC7 2435 aa9.63□□□□□ -0.87
SFSWAP-208ENST00000539506 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.63□□□□□ -0.872e-6■■■□□ 16.5
SFSWAP-208ENST00000539506 BUB3O43684 328 aa9.63□□□□□ -0.87
SFSWAP-208ENST00000539506 OR5A1Q8NGJ0 315 aa9.63□□□□□ -0.87
SFSWAP-208ENST00000539506 TMEM190Q8WZ59 177 aa9.63□□□□□ -0.87
SFSWAP-208ENST00000539506 IGKV3D-20A0A0C4DH25 116 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 IGLL5B9A064 214 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 CEND1Q8N111 149 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 SPAG8Q99932 426 aaPredicted RBP9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 DPM2O94777 84 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 CLEC19AQ6UXS0 136 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 UTP20O75691 2785 aaKnown RBP9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 IGHV3OR16-10A0A075B7F0 116 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 FABP5P3A8MUU1 101 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 TMEM219Q86XT9 240 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 PHLDA1Q8WV24 401 aaPredicted RBP9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 SIGMAR1Q99720 223 aa9.62□□□□□ -0.87
SFSWAP-208ENST00000539506 CENPVL3A0A0U1RRI6 287 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 GAGE12HA6NDE8 117 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 M0R381 172 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 KLK9Q2XQG4 91 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 C12orf74Q32Q52 190 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 ITLN2Q8WWU7 325 aaPredicted RBP9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 PTH2Q96A98 100 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 HIF1ANQ9NWT6 349 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 KLK9Q9UKQ9 250 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 MYOZ3Q8TDC0 251 aa9.61□□□□□ -0.87
SFSWAP-208ENST00000539506 H3BVH4 76 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 SPANXN1Q5VSR9 72 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 C20orf78Q9BR46 151 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 A0A1B0GWB2 263 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 SIVA1O15304 175 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 ZNF418Q8TF45 676 aaPredicted RBP9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 GLMPQ8WWB7 406 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 TRAV8-2A0A0B4J237 113 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 DPF1Q92782 380 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 AGPAT4-IT1Q9H0P7 198 aa9.6□□□□□ -0.87
SFSWAP-208ENST00000539506 LOC107984156A0A0G2JMH3 177 aa9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 NPFFO15130 113 aa9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 ARL17AQ8IVW1 177 aa9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 C5orf56Q8N8D9 126 aa9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 FLNCQ14315 2725 aa9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
SFSWAP-208ENST00000539506 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 RPL39LQ96EH5 51 aaKnown RBP9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 DOPEY2Q9Y3R5 2298 aa9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 APOMO95445 188 aa9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 IGHV4-39P01824 125 aa9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 HLA-DRB4P13762 266 aa9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 HLA-DRB4X5D2U9 266 aa9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 GNLYP22749 145 aa9.58□□□□□ -0.88
SFSWAP-208ENST00000539506 MGPP08493 103 aa9.57□□□□□ -0.88
SFSWAP-208ENST00000539506 GAGE13Q4V321 117 aa9.57□□□□□ -0.88
SFSWAP-208ENST00000539506 BRD3OSQ6XYD6 125 aa9.57□□□□□ -0.88
SFSWAP-208ENST00000539506 ZFP2Q6ZN57 461 aa9.57□□□□□ -0.88
SFSWAP-208ENST00000539506 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-208ENST00000539506 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
SFSWAP-208ENST00000539506 E9PLD3 99 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 LAGE3Q14657 143 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 CD300EQ496F6 205 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 C14orf178Q8N769 122 aaPredicted RBP9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 PSMB2P49721 201 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 C19orf54Q5BKX5 351 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 PGPEP1Q9NXJ5 209 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 TRBV12-3P01733 135 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 PRR9Q5T870 116 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 Q8N8P6 123 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 PLEKHB2Q96CS7 222 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 CNFNQ9BYD5 112 aa9.56□□□□□ -0.88
SFSWAP-208ENST00000539506 PKD1L2Q7Z442 2459 aa9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 SCGB2A1O75556 95 aa9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 RPL11P62913 178 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 SCGB1D4Q6XE38 83 aa9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 PRORYQ9H606 182 aa9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
SFSWAP-208ENST00000539506 F6UB75 175 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms