RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ZNF727A8MUV8 499 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 PDE6DO43924 150 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 PAGE4O60829 102 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 IGLV2-8P01709 118 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 HTN1P15515 57 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 AZU1P20160 251 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 GAMTQ14353 236 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 TIGITQ495A1 244 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 ISOC2Q96AB3 205 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 SDF2L1Q9HCN8 221 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 ARL2-SNX15V9GYD0 113 aa6.15□□□□□ -1.42
USP28-205ENST00000537706 IGKV1OR2-108A0A075B7D4 117 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 F6UZH7 168 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 PRM2P04554 102 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 LINC00869P0C866 280 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 RAB5AP20339 215 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 TDRG1Q3Y452 100 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 Q6ZRU5 148 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 PARLQ9H300 379 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 TMEM242Q9NWH2 141 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 PRELID1Q9Y255 219 aa6.15□□□□□ -1.43
USP28-205ENST00000537706 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 ISLRO14498 428 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 BUB3O43684 328 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 GAGE7O76087 117 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 OR5G3P0C626 314 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 GAGE12FP0CL80 117 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 GAGE12GP0CL81 117 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 GAGE12IP0CL82 117 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 HOXA5P20719 270 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 GCHFRP30047 84 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 OR10J1P30954 320 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 RAB5BP61020 215 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 RPUSD4Q96CM3 377 aaKnown RBP6.14□□□□□ -1.43
USP28-205ENST00000537706 PPP1R14DQ9NXH3 145 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 FUT9Q9Y231 359 aa6.14□□□□□ -1.43
USP28-205ENST00000537706 LRP2P98164 4655 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 C1orf196B1AJZ1 125 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 F6UB75 175 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 IL4P05112 153 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 CRYGDP07320 174 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 RND2P52198 227 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 TMEM241Q24JQ0 296 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 ETFRF1Q6IPR1 90 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 THAP8Q8NA92 274 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 TMEM263Q8WUH6 116 aaKnown RBP6.13□□□□□ -1.43
USP28-205ENST00000537706 CHAC1Q9BUX1 264 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 MRPL32Q9BYC8 188 aaKnown RBP6.13□□□□□ -1.43
USP28-205ENST00000537706 CTDSP1Q9GZU7 261 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 SNURFLB1AK76 121 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 M0R2Z0 102 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 TAS2R45P59539 299 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 UBE2G2P60604 165 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 YPEL3P61236 119 aaPredicted RBP6.13□□□□□ -1.43
USP28-205ENST00000537706 ZNF674Q2M3X9 581 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 TMEM37Q8WXS4 190 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 ACY3Q96HD9 319 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 TMEM167BQ9NRX6 74 aa6.13□□□□□ -1.43
USP28-205ENST00000537706 A8MTW9 85 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 MEOX2P50222 304 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 SELENOTP62341 195 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 RPL23P62829 140 aaKnown RBP6.12□□□□□ -1.43
USP28-205ENST00000537706 ELOBQ15370 118 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 ADIRFQ15847 76 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 CST9LP1Q5W188 147 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 LINC00612Q8N6U2 182 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 C11orf52Q96A22 123 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 C16orf92Q96LL3 132 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 PFDN5Q99471 154 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 BIN3Q9NQY0 253 aa6.12□□□□□ -1.43
USP28-205ENST00000537706 IGKV1D-37A0A075B6S9 117 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 IGKV1-17P01599 117 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 IGLV2-11P01706 119 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 LELP1Q5T871 98 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 AMTNQ6UX39 209 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 MIR17HGQ75NE6 70 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 OR1L4Q8NGR5 311 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 CRXO43186 299 aaPredicted RBP6.11□□□□□ -1.43
USP28-205ENST00000537706 PAX4O43316 350 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 MLANAQ16655 118 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 ZFP82Q8N141 532 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 OR51G1Q8NGK1 321 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 NPIPB3Q92617 1050 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 VSIG2Q96IQ7 327 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 TRGV9Q99603 122 aa6.11□□□□□ -1.43
USP28-205ENST00000537706 TRGV2A0A075B6R0 118 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 SCO2A0A1W2PP80 73 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 COX7A2P2O60397 106 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 GATA2P23769 480 aaPredicted RBP6.1□□□□□ -1.43
USP28-205ENST00000537706 CNN1P51911 297 aaKnown RBP6.1□□□□□ -1.43
USP28-205ENST00000537706 MRPL23Q16540 153 aaKnown RBP6.1□□□□□ -1.43
USP28-205ENST00000537706 SMUG1Q53HV7 270 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 LYPD5Q6UWN5 251 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 LINC01551Q86U37 167 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms