RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 A0A0J9YY99 117 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 GCGP01275 180 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 TYMSP04818 313 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 LGALS9BQ3B8N2 356 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 UBE2DNLQ8IWF7 75 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 FRAS1Q86XX4 4008 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 DNAH10Q8IVF4 4471 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 FBLL1A6NHQ2 334 aaKnown RBP12.08□□□□□ -0.47
GPN3-202ENST00000537466 CST9LP1Q5W188 147 aa12.08□□□□□ -0.47
GPN3-202ENST00000537466 DPPA3Q6W0C5 159 aa12.08□□□□□ -0.47
GPN3-202ENST00000537466 AKAP14Q86UN6 197 aa12.08□□□□□ -0.47
GPN3-202ENST00000537466 ARL2-SNX15V9GYD0 113 aa12.08□□□□□ -0.47
GPN3-202ENST00000537466 IGHV3-16A0A0C4DH30 117 aa12.08□□□□□ -0.48
GPN3-202ENST00000537466 PAGE4O60829 102 aa12.08□□□□□ -0.48
GPN3-202ENST00000537466 ZFP69Q49AA0 526 aa12.08□□□□□ -0.48
GPN3-202ENST00000537466 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
GPN3-202ENST00000537466 Q86TA4 180 aa12.08□□□□□ -0.48
GPN3-202ENST00000537466 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
GPN3-202ENST00000537466 IGHV3-53P01767 116 aa12.07□□□□□ -0.48
GPN3-202ENST00000537466 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
GPN3-202ENST00000537466 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
GPN3-202ENST00000537466 RNF212Q495C1 297 aa12.07□□□□□ -0.48
GPN3-202ENST00000537466 SAPCD1Q5SSQ6 148 aa12.07□□□□□ -0.48
GPN3-202ENST00000537466 SDF2L1Q9HCN8 221 aa12.07□□□□□ -0.48
GPN3-202ENST00000537466 PPT1P50897 306 aa12.06□□□□□ -0.48
GPN3-202ENST00000537466 KCNS1Q96KK3 526 aa12.06□□□□□ -0.48
GPN3-202ENST00000537466 SPXQ9BT56 116 aa12.06□□□□□ -0.48
GPN3-202ENST00000537466 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
GPN3-202ENST00000537466 RASL10AQ92737 203 aa12.05□□□□□ -0.48
GPN3-202ENST00000537466 VSIG2Q96IQ7 327 aa12.05□□□□□ -0.48
GPN3-202ENST00000537466 IGLV2-18A0A075B6J9 118 aa12.04□□□□□ -0.48
GPN3-202ENST00000537466 H3BNG1 76 aa12.03□□□□□ -0.48
GPN3-202ENST00000537466 M0R2N4 97 aa12.03□□□□□ -0.48
GPN3-202ENST00000537466 CCL20P78556 96 aa12.03□□□□□ -0.48
GPN3-202ENST00000537466 SLC51BQ86UW2 128 aa12.03□□□□□ -0.48
GPN3-202ENST00000537466 C9orf62Q8N4C0 152 aa12.03□□□□□ -0.48
GPN3-202ENST00000537466 FMC1Q96HJ9 113 aa12.03□□□□□ -0.48
GPN3-202ENST00000537466 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
GPN3-202ENST00000537466 M0R2P5 195 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 SFTA3P0C7M3 94 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 SULT1A2P50226 295 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 UBE2G1P62253 170 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 FHL2Q14192 279 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 EIF5AL1Q6IS14 154 aaKnown RBP12.02□□□□□ -0.48
GPN3-202ENST00000537466 ZC2HC1AQ96GY0 325 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 ZNF479Q96JC4 524 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 LINC00588Q9Y4M8 146 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 DNAH2Q9P225 4427 aa12.02□□□□□ -0.48
GPN3-202ENST00000537466 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
GPN3-202ENST00000537466 SCO2A0A1W2PP80 73 aa12.02□□□□□ -0.49
GPN3-202ENST00000537466 AKR1C3P42330 323 aa12.02□□□□□ -0.49
GPN3-202ENST00000537466 CRIP1P50238 77 aa12.02□□□□□ -0.49
GPN3-202ENST00000537466 RAB5CP51148 216 aa12.02□□□□□ -0.49
GPN3-202ENST00000537466 A0A096LPF7 62 aa12.01□□□□□ -0.49
GPN3-202ENST00000537466 TRBV6-1A0A0K0K1D8 114 aa12.01□□□□□ -0.49
GPN3-202ENST00000537466 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
GPN3-202ENST00000537466 CCL18P55774 89 aa12.01□□□□□ -0.49
GPN3-202ENST00000537466 ZFP30Q9Y2G7 519 aa12.01□□□□□ -0.49
GPN3-202ENST00000537466 TRAV1-1A0A0B4J248 108 aa12□□□□□ -0.49
GPN3-202ENST00000537466 LTAP01374 205 aa12□□□□□ -0.49
GPN3-202ENST00000537466 RNASE3P12724 160 aaKnown RBP12□□□□□ -0.49
GPN3-202ENST00000537466 CRYBA4P53673 196 aa12□□□□□ -0.49
GPN3-202ENST00000537466 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
GPN3-202ENST00000537466 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
GPN3-202ENST00000537466 ZNRF2Q8NHG8 242 aa12□□□□□ -0.49
GPN3-202ENST00000537466 C9orf85Q96MD7 179 aa12□□□□□ -0.49
GPN3-202ENST00000537466 PRO0255Q9UI72 69 aa12□□□□□ -0.49
GPN3-202ENST00000537466 TRGV4A0A0C4DH28 118 aa11.99□□□□□ -0.49
GPN3-202ENST00000537466 PAX4O43316 350 aa11.99□□□□□ -0.49
GPN3-202ENST00000537466 ESRGQ1W209 222 aa11.99□□□□□ -0.49
GPN3-202ENST00000537466 Q6ZR54 194 aa11.99□□□□□ -0.49
GPN3-202ENST00000537466 GNG13Q9P2W3 67 aa11.99□□□□□ -0.49
GPN3-202ENST00000537466 HHLA3Q9XRX5 114 aa11.99□□□□□ -0.49
GPN3-202ENST00000537466 TRAV4A0A0B4J268 109 aa11.98□□□□□ -0.49
GPN3-202ENST00000537466 C9JCJ5 164 aa11.98□□□□□ -0.49
GPN3-202ENST00000537466 SH2D1AO60880 128 aa11.98□□□□□ -0.49
GPN3-202ENST00000537466 NHLRC2Q8NBF2 726 aa11.98□□□□□ -0.49
GPN3-202ENST00000537466 ORM1P02763 201 aa11.97□□□□□ -0.49
GPN3-202ENST00000537466 ZNF876PQ49A33 203 aa11.97□□□□□ -0.49
GPN3-202ENST00000537466 OR4C5Q8NGB2 326 aa11.97□□□□□ -0.49
GPN3-202ENST00000537466 MANBALQ9NQG1 85 aa11.97□□□□□ -0.49
GPN3-202ENST00000537466 PGPEP1LA6NFU8 196 aa11.96□□□□□ -0.49
GPN3-202ENST00000537466 B4DEV8 164 aa11.96□□□□□ -0.49
GPN3-202ENST00000537466 M0R036 132 aa11.96□□□□□ -0.49
GPN3-202ENST00000537466 SLAQ13239 276 aa11.96□□□□□ -0.49
GPN3-202ENST00000537466 ZNF674Q2M3X9 581 aa11.96□□□□□ -0.49
GPN3-202ENST00000537466 FAM162BQ5T6X4 162 aa11.96□□□□□ -0.49
GPN3-202ENST00000537466 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
GPN3-202ENST00000537466 KRBOX1C9JBD0 128 aa11.95□□□□□ -0.5
GPN3-202ENST00000537466 NKX2-5P52952 324 aaPredicted RBP11.95□□□□□ -0.5
GPN3-202ENST00000537466 ZNF506Q5JVG8 444 aa11.95□□□□□ -0.5
GPN3-202ENST00000537466 ZNF575Q86XF7 245 aa11.95□□□□□ -0.5
GPN3-202ENST00000537466 BIRC6Q9NR09 4857 aa11.95□□□□□ -0.5
GPN3-202ENST00000537466 DNAH17Q9UFH2 4485 aa11.95□□□□□ -0.5
GPN3-202ENST00000537466 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
GPN3-202ENST00000537466 S100A9P06702 114 aaKnown RBP11.95□□□□□ -0.5
GPN3-202ENST00000537466 ASIPP42127 132 aa11.95□□□□□ -0.5
GPN3-202ENST00000537466 FAT2Q9NYQ8 4349 aa11.94□□□□□ -0.5
GPN3-202ENST00000537466 RTL8CO15255 209 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms