RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MSRB1Q9NZV6 116 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 KIAA1549Q9HCM3 1950 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 MED12Q93074 2177 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 TRBV7-3A0A075B6L6 115 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 CCL21O00585 134 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 DIAPH2-AS1Q14236 149 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 HHLA3Q9XRX5 114 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 UQCRQO14949 82 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 TMEM219Q86XT9 240 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 TRPT1Q86TN4 253 aaKnown RBP4.24□□□□□ -1.73
PTPRD-213ENST00000537002 LINC00311Q8N616 119 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 LINC01560Q8TB33 94 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 SPRY2O43597 315 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 KLHL30-AS1Q8NEE0 82 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 LINC01587Q99440 93 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 NTN3O00634 580 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-213ENST00000537002 LY6G5BQ8NDX9 201 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 CFHR4Q92496 578 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 LEPROTO15243 131 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 INAFM2P0DMQ5 153 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 SYNJ2BPP57105 145 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 MDFICQ9P1T7 246 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 EGR2P11161 476 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-213ENST00000537002 GATA4P43694 442 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 LINC01620Q4KN68 170 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 IGKV1OR2-108A0A075B7D4 117 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 NRGNQ92686 78 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 ASXL3Q9C0F0 2248 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 PAX4O43316 350 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 LYPD2Q6UXB3 125 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 ZNF833PQ6ZTB9 187 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 RASL10AQ92737 203 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 CACNA1EQ15878 2313 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 B9A039 149 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 PAX8Q06710 450 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 LINC00477Q96M19 166 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
PTPRD-213ENST00000537002 CACNA1GO43497 2377 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 DUSP14O95147 198 aaKnown RBP4.22□□□□□ -1.73
PTPRD-213ENST00000537002 FDCSPQ8NFU4 85 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 PROK2Q9HC23 129 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 SDK2Q58EX2 2172 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 RBAKDNA6NC62 111 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 RBMY1FQ15415 496 aaKnown RBP4.22□□□□□ -1.73
PTPRD-213ENST00000537002 PCDH15Q96QU1 1955 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 TRGV11A0A075B6L2 103 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 SOCS3O14543 225 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 TCL1BO95988 128 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 MUSTN1Q8IVN3 82 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 A0A096LNJ9 63 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 TINCRA0A1B0GVN0 87 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 CXCL5P42830 114 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 SHISA2Q6UWI4 295 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 C9orf139Q6ZV77 190 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 PRIMA1Q86XR5 153 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 ITLN2Q8WWU7 325 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-213ENST00000537002 LAMTOR3Q9UHA4 124 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 SDHAF1A6NFY7 115 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 CGB3P0DN86 165 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 CGB7P0DN87 165 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 TRBV7-7A0A0K0K1E9 115 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 BUB1B-PAK6H3BSN5 160 aa4.22□□□□□ -1.73
PTPRD-213ENST00000537002 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
PTPRD-213ENST00000537002 TRAV41A0A0B4J266 112 aa4.21□□□□□ -1.73
PTPRD-213ENST00000537002 A4D1N5 150 aa4.21□□□□□ -1.73
PTPRD-213ENST00000537002 M0R1W7 72 aa4.21□□□□□ -1.73
PTPRD-213ENST00000537002 INSL3P51460 131 aa4.21□□□□□ -1.73
PTPRD-213ENST00000537002 TEX36Q5VZQ5 186 aa4.21□□□□□ -1.73
PTPRD-213ENST00000537002 LENEPQ9Y5L5 61 aa4.21□□□□□ -1.73
PTPRD-213ENST00000537002 TNFRSF13BO14836 293 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-213ENST00000537002 NDUFA11Q86Y39 141 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 OVOL2Q9BRP0 275 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 K7ENP7 123 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 LINC00322Q6ZN03 302 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-213ENST00000537002 ICOSQ9Y6W8 199 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 EML6Q6ZMW3 1958 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 FER1L5A0AVI2 2057 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 AGRNO00468 2067 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 ATOX1O00244 68 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 IGLC6P0CF74 106 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 IGFBPL1Q8WX77 278 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 CLEC2BQ92478 149 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 TMEM243Q9BU79 118 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 DKK4Q9UBT3 224 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 CEP192Q8TEP8 1941 aa4.21□□□□□ -1.74
PTPRD-213ENST00000537002 TRBV10-2A0A0K0K1G8 114 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 IGF2-ASQ6U949 168 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 DYNAPQ8N1N2 210 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 IGKV3D-7A0A0C4DH55 119 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 TMEM178BH3BS89 294 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 NDUFA7O95182 113 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 TMEM258P61165 79 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 KNCNA6PVL3 124 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 PROP1O75360 226 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 ZNRF2Q8NHG8 242 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 RPL39LQ96EH5 51 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms