RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TDRG1Q3Y452 100 aa13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 FAM74A1Q5RGS3 127 aa13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 OR2G3Q8NGZ4 309 aa13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 CMTM2Q8TAZ6 248 aa13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 TXNDC17Q9BRA2 123 aa13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 PSMG3Q9BT73 122 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 OTORQ9NRC9 128 aa13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 DMBT1Q9UGM3 2413 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-204ENST00000536782 TRAV4A0A0B4J268 109 aa13.34□□□□□ -0.27
TNFRSF1B-204ENST00000536782 PGPA6NDG6 321 aa13.34□□□□□ -0.27
TNFRSF1B-204ENST00000536782 C9JCJ5 164 aa13.34□□□□□ -0.27
TNFRSF1B-204ENST00000536782 DNAH10OSP0CZ25 163 aa13.34□□□□□ -0.27
TNFRSF1B-204ENST00000536782 OR4C5Q8NGB2 326 aa13.34□□□□□ -0.27
TNFRSF1B-204ENST00000536782 RPH3ALQ9UNE2 315 aa13.34□□□□□ -0.27
TNFRSF1B-204ENST00000536782 TNFSF18Q9UNG2 199 aa13.34□□□□□ -0.27
TNFRSF1B-204ENST00000536782 FXYD6-FXYD2A0A087WZ82 144 aa13.33□□□□□ -0.28
TNFRSF1B-204ENST00000536782 RNF222A6NCQ9 220 aa13.33□□□□□ -0.28
TNFRSF1B-204ENST00000536782 TRAV21A0A0B4J279 112 aa13.32□□□□□ -0.28
TNFRSF1B-204ENST00000536782 A0A1W2PPV4 95 aa13.32□□□□□ -0.28
TNFRSF1B-204ENST00000536782 M0R2P5 195 aa13.32□□□□□ -0.28
TNFRSF1B-204ENST00000536782 GNRH2O43555 120 aa13.32□□□□□ -0.28
TNFRSF1B-204ENST00000536782 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
TNFRSF1B-204ENST00000536782 PQLC2Q6ZP29 291 aa13.32□□□□□ -0.28
TNFRSF1B-204ENST00000536782 HSD17B11Q8NBQ5 300 aa13.32□□□□□ -0.28
TNFRSF1B-204ENST00000536782 IGHV3-16A0A0C4DH30 117 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 G3V3Q6 166 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 MBP02144 154 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 ATP6V0CP27449 155 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 XGP55808 180 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 RAB2AP61019 212 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 SERF2P84101 59 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 GOLT1AQ6ZVE7 132 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 SH2D6Q7Z4S9 175 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 C10orf126Q8N4M7 172 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
TNFRSF1B-204ENST00000536782 CRYGDP07320 174 aa13.3□□□□□ -0.28
TNFRSF1B-204ENST00000536782 OR10G9Q8NGN4 311 aa13.3□□□□□ -0.28
TNFRSF1B-204ENST00000536782 OR10G7Q8NGN6 311 aa13.3□□□□□ -0.28
TNFRSF1B-204ENST00000536782 TREM1Q9NP99 234 aa13.3□□□□□ -0.28
TNFRSF1B-204ENST00000536782 VPS13BQ7Z7G8 4022 aa13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 BORCS7-ASMTA0A0B4J1R7 106 aa13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 F6UZH7 168 aa13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 TYMSP04818 313 aa13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 CDC34P49427 236 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 KRTAP10-1P60331 282 aa13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 KCNS1Q96KK3 526 aa13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 SDF2L1Q9HCN8 221 aa13.29□□□□□ -0.28
TNFRSF1B-204ENST00000536782 LOC100131303A0A0U1RQF7 123 aa13.28□□□□□ -0.28
TNFRSF1B-204ENST00000536782 NHLRC2Q8NBF2 726 aa13.28□□□□□ -0.28
TNFRSF1B-204ENST00000536782 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
TNFRSF1B-204ENST00000536782 FLG2Q5D862 2391 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1B-204ENST00000536782 TRAV8-1A0A0A6YYK1 113 aa13.27□□□□□ -0.29
TNFRSF1B-204ENST00000536782 TAAR5O14804 337 aa13.27□□□□□ -0.29
TNFRSF1B-204ENST00000536782 GATA1P15976 413 aaPredicted RBP13.27□□□□□ -0.29
TNFRSF1B-204ENST00000536782 TIRAPP58753 221 aa13.27□□□□□ -0.29
TNFRSF1B-204ENST00000536782 RPL7L1Q6DKI1 246 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1B-204ENST00000536782 MYCBP2O75592 4640 aa13.27□□□□□ -0.29
TNFRSF1B-204ENST00000536782 STAG3L2P0CL84 134 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 INAFM2P0DMQ5 153 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 GCSHP23434 173 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 PPT1P50897 306 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 GNG5P63218 68 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 FRZBQ92765 325 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
TNFRSF1B-204ENST00000536782 IGHV3-38A0A0C4DH36 116 aa13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 FBLL1A6NHQ2 334 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 ARPC5O15511 151 aa13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 Q5VSD8 79 aa13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 RAB24Q969Q5 203 aa13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 NDFIP1Q9BT67 221 aa13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 SRRM2Q9UQ35 2752 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1B-204ENST00000536782 PSCAO43653 123 aa13.24□□□□□ -0.29
TNFRSF1B-204ENST00000536782 PFN1P07737 140 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1B-204ENST00000536782 ARL14EPLP0DKL9 152 aa13.24□□□□□ -0.29
TNFRSF1B-204ENST00000536782 ZNF876PQ49A33 203 aa13.24□□□□□ -0.29
TNFRSF1B-204ENST00000536782 SGK494Q96LW2 274 aa13.24□□□□□ -0.29
TNFRSF1B-204ENST00000536782 ACTR3CQ9C0K3 210 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1B-204ENST00000536782 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 CIDEAO60543 219 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 ZNF345Q14585 488 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 LINC01556Q5JQF7 62 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 SLC25A29Q8N8R3 303 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 PRADC1Q9BSG0 188 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
TNFRSF1B-204ENST00000536782 TRAV8-6A0A0B4J262 113 aa13.22□□□□□ -0.29
TNFRSF1B-204ENST00000536782 SMLR1H3BR10 107 aa13.22□□□□□ -0.29
TNFRSF1B-204ENST00000536782 TMEM167BQ9NRX6 74 aa13.22□□□□□ -0.29
TNFRSF1B-204ENST00000536782 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 IBA57-AS1B1ANH7 110 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 K7EQM0 130 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 RS1O15537 224 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 CXorf1O96002 111 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 TCRAP04437 139 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 GCHFRP30047 84 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 RHOHQ15669 191 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 CFAP126Q5VTH2 177 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms