RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 C11orf21Q9P2W6 132 aa16.02■□□□□ 0.16
SFSWAP-204ENST00000535399 TRGV11A0A075B6L2 103 aa16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 TRBV6-1A0A0K0K1D8 114 aa16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 LY6G6CO95867 125 aa16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 PFN1P07737 140 aaKnown RBP16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 FMC1Q96HJ9 113 aa16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 NDUFAF3Q9BU61 184 aa16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 MANBALQ9NQG1 85 aa16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 VPS13DQ5THJ4 4388 aa16.01■□□□□ 0.15
SFSWAP-204ENST00000535399 HYDINQ4G0P3 5121 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 TRGV1A0A0A0MS02 117 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 SCO2A0A1W2PP80 73 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 TEX46H3BTG2 121 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 GNRH2O43555 120 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 AKR1C3P42330 323 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 LGALS9CQ6DKI2 356 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 TMEM88Q6PEY1 159 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 ALKAL2Q6UX46 152 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 ZFP30Q9Y2G7 519 aa16■□□□□ 0.15
SFSWAP-204ENST00000535399 IGHV3-16A0A0C4DH30 117 aa15.99■□□□□ 0.15
SFSWAP-204ENST00000535399 F5H768 121 aa15.99■□□□□ 0.15
SFSWAP-204ENST00000535399 TYMSP04818 313 aa15.99■□□□□ 0.15
SFSWAP-204ENST00000535399 COX8CQ7Z4L0 72 aa15.99■□□□□ 0.15
SFSWAP-204ENST00000535399 C18orf15Q96N68 181 aa15.99■□□□□ 0.15
SFSWAP-204ENST00000535399 UBE2G1P62253 170 aa15.98■□□□□ 0.15
SFSWAP-204ENST00000535399 LGALS9BQ3B8N2 356 aa15.98■□□□□ 0.15
SFSWAP-204ENST00000535399 KCNS1Q96KK3 526 aa15.98■□□□□ 0.15
SFSWAP-204ENST00000535399 SDF2L1Q9HCN8 221 aa15.98■□□□□ 0.15
SFSWAP-204ENST00000535399 LTAP01374 205 aa15.97■□□□□ 0.15
SFSWAP-204ENST00000535399 MRPL16Q9NX20 251 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-204ENST00000535399 TRGV2A0A075B6R0 118 aa15.96■□□□□ 0.15
SFSWAP-204ENST00000535399 CRIP1P50238 77 aa15.96■□□□□ 0.15
SFSWAP-204ENST00000535399 ZC2HC1AQ96GY0 325 aa15.96■□□□□ 0.15
SFSWAP-204ENST00000535399 SPXQ9BT56 116 aa15.96■□□□□ 0.15
SFSWAP-204ENST00000535399 S100A9P06702 114 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-204ENST00000535399 HOXA5P20719 270 aa15.95■□□□□ 0.14
SFSWAP-204ENST00000535399 C11orf52Q96A22 123 aa15.95■□□□□ 0.14
SFSWAP-204ENST00000535399 FABP5P3A8MUU1 101 aa15.94■□□□□ 0.14
SFSWAP-204ENST00000535399 TXNDC17Q9BRA2 123 aa15.94■□□□□ 0.14
SFSWAP-204ENST00000535399 IGKV3D-20A0A0C4DH25 116 aa15.93■□□□□ 0.14
SFSWAP-204ENST00000535399 RASL10AQ92737 203 aa15.93■□□□□ 0.14
SFSWAP-204ENST00000535399 KMT2AQ03164 3969 aa15.92■□□□□ 0.14
SFSWAP-204ENST00000535399 IFNA1P01562 189 aa15.92■□□□□ 0.14
SFSWAP-204ENST00000535399 BCL2P10415 239 aa15.92■□□□□ 0.14
SFSWAP-204ENST00000535399 BLOC1S1P78537 153 aa15.92■□□□□ 0.14
SFSWAP-204ENST00000535399 OR5I1Q13606 314 aa15.92■□□□□ 0.14
SFSWAP-204ENST00000535399 C15orf53Q8NAA6 179 aa15.92■□□□□ 0.14
SFSWAP-204ENST00000535399 M0R2P5 195 aa15.91■□□□□ 0.14
SFSWAP-204ENST00000535399 SH2D1AO60880 128 aa15.91■□□□□ 0.14
SFSWAP-204ENST00000535399 MEF2BQ02080 365 aaPredicted RBP15.91■□□□□ 0.14
SFSWAP-204ENST00000535399 ZNF674Q2M3X9 581 aa15.91■□□□□ 0.14
SFSWAP-204ENST00000535399 MLST8Q9BVC4 326 aa15.91■□□□□ 0.14
SFSWAP-204ENST00000535399 RPL35P42766 123 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 FAM162BQ5T6X4 162 aa15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 BAGE2Q86Y30 109 aa15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 NHLRC2Q8NBF2 726 aa15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 LYPD6BQ8NI32 183 aa15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 C9orf85Q96MD7 179 aa15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 DERL1Q9BUN8 251 aa15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 VAX2Q9UIW0 290 aa15.9■□□□□ 0.14
SFSWAP-204ENST00000535399 TRAV26-1A0A087WT03 109 aa15.89■□□□□ 0.13
SFSWAP-204ENST00000535399 IGHV3-53P01767 116 aa15.89■□□□□ 0.13
SFSWAP-204ENST00000535399 P0DMU3 169 aa15.89■□□□□ 0.13
SFSWAP-204ENST00000535399 FAM231AP0DMU4 169 aa15.89■□□□□ 0.13
SFSWAP-204ENST00000535399 FAM231CP0DMU5 169 aa15.89■□□□□ 0.13
SFSWAP-204ENST00000535399 PDE6DO43924 150 aa15.88■□□□□ 0.13
SFSWAP-204ENST00000535399 ORM1P02763 201 aa15.88■□□□□ 0.13
SFSWAP-204ENST00000535399 RNASE3P12724 160 aaKnown RBP15.88■□□□□ 0.13
SFSWAP-204ENST00000535399 TAGLN2P37802 199 aaKnown RBP15.88■□□□□ 0.13
SFSWAP-204ENST00000535399 MUC4Q99102 2169 aa15.87■□□□□ 0.13
SFSWAP-204ENST00000535399 DNAH6Q9C0G6 4158 aa15.87■□□□□ 0.13
SFSWAP-204ENST00000535399 A0A0J9YY99 117 aa15.87■□□□□ 0.13
SFSWAP-204ENST00000535399 B4DEV8 164 aa15.87■□□□□ 0.13
SFSWAP-204ENST00000535399 KRBOX1C9JBD0 128 aa15.87■□□□□ 0.13
SFSWAP-204ENST00000535399 ZNF575Q86XF7 245 aa15.87■□□□□ 0.13
SFSWAP-204ENST00000535399 POM121L12Q8N7R1 296 aa15.87■□□□□ 0.13
SFSWAP-204ENST00000535399 M0R036 132 aa15.86■□□□□ 0.13
SFSWAP-204ENST00000535399 NUDT3O95989 172 aa15.86■□□□□ 0.13
SFSWAP-204ENST00000535399 VSIG2Q96IQ7 327 aa15.86■□□□□ 0.13
SFSWAP-204ENST00000535399 H3BNG1 76 aa15.85■□□□□ 0.13
SFSWAP-204ENST00000535399 SFTA3P0C7M3 94 aa15.85■□□□□ 0.13
SFSWAP-204ENST00000535399 FHL2Q14192 279 aa15.85■□□□□ 0.13
SFSWAP-204ENST00000535399 LINC01559Q495D7 138 aa15.85■□□□□ 0.13
SFSWAP-204ENST00000535399 TRAV4A0A0B4J268 109 aa15.84■□□□□ 0.13
SFSWAP-204ENST00000535399 ASIPP42127 132 aa15.84■□□□□ 0.13
SFSWAP-204ENST00000535399 CENPWQ5EE01 88 aa15.84■□□□□ 0.13
SFSWAP-204ENST00000535399 DNLZQ5SXM8 178 aa15.84■□□□□ 0.13
SFSWAP-204ENST00000535399 PTH2Q96A98 100 aa15.84■□□□□ 0.13
SFSWAP-204ENST00000535399 ZNF479Q96JC4 524 aa15.84■□□□□ 0.13
SFSWAP-204ENST00000535399 MED9Q9NWA0 146 aa15.84■□□□□ 0.13
SFSWAP-204ENST00000535399 RAB19A4D1S5 217 aa15.83■□□□□ 0.12
SFSWAP-204ENST00000535399 S100A4P26447 101 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-204ENST00000535399 ZNF876PQ49A33 203 aa15.83■□□□□ 0.12
SFSWAP-204ENST00000535399 PGPEP1LA6NFU8 196 aa15.82■□□□□ 0.12
SFSWAP-204ENST00000535399 C9JCJ5 164 aa15.82■□□□□ 0.12
SFSWAP-204ENST00000535399 IGLV2-8P01709 118 aa15.82■□□□□ 0.12
SFSWAP-204ENST00000535399 IL36BQ9NZH7 164 aa15.82■□□□□ 0.12
SFSWAP-204ENST00000535399 TMSB15BA0A087X1C1 80 aa15.81■□□□□ 0.12
SFSWAP-204ENST00000535399 GRIFINA4D1Z8 144 aa15.81■□□□□ 0.12
SFSWAP-204ENST00000535399 RBFOX3A6NFN3 312 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms