RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 RAB24Q969Q5 203 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 HIST1H2BAQ96A08 127 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 TREM1Q9NP99 234 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 IGHV3-16A0A0C4DH30 117 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 ARL14EPLP0DKL9 152 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 SMUG1Q53HV7 270 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 EPDR1Q9UM22 224 aa7.17□□□□□ -1.26
CSDE1-217ENST00000534699 GOLT1AQ6ZVE7 132 aa7.16□□□□□ -1.26
CSDE1-217ENST00000534699 DNAH17Q9UFH2 4485 aa7.16□□□□□ -1.26
CSDE1-217ENST00000534699 F6UZH7 168 aa7.16□□□□□ -1.26
CSDE1-217ENST00000534699 PFN1P07737 140 aaKnown RBP7.16□□□□□ -1.26
CSDE1-217ENST00000534699 EIF5AP63241 154 aaKnown RBP7.16□□□□□ -1.26
CSDE1-217ENST00000534699 DPPA3Q6W0C5 159 aa7.16□□□□□ -1.26
CSDE1-217ENST00000534699 PSG8Q9UQ74 426 aa7.16□□□□□ -1.26
CSDE1-217ENST00000534699 RS1O15537 224 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 SRIP30626 198 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 FLI1Q01543 452 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-217ENST00000534699 ZNF345Q14585 488 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 ZFP2Q6ZN57 461 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 A0A0J9YY99 117 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 TRBV6-4A0A1B0GX49 114 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 TMEM183BQ1AE95 376 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 LYPD5Q6UWN5 251 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 OR4C5Q8NGB2 326 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 Q8TAT8 98 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 STOML3Q8TAV4 291 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 C9orf85Q96MD7 179 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 PGPEP1Q9NXJ5 209 aa7.15□□□□□ -1.26
CSDE1-217ENST00000534699 DNAH10OSP0CZ25 163 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 LGALSLQ3ZCW2 172 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-217ENST00000534699 PRADC1Q9BSG0 188 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 MRPL16Q9NX20 251 aaKnown RBP7.14□□□□□ -1.27
CSDE1-217ENST00000534699 RNF222A6NCQ9 220 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 UMAD1C9J7I0 102 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 NXPH4O95158 308 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 TYMSP04818 313 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 CXCL1P09341 107 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 GATA1P15976 413 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-217ENST00000534699 NDUFA5Q16718 116 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 AKR1C8PQ5T2L2 129 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 HSD17B11Q8NBQ5 300 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 MUC4Q99102 2169 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 HMSDA8MTL9 139 aa7.14□□□□□ -1.27
CSDE1-217ENST00000534699 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
CSDE1-217ENST00000534699 FABP5P3A8MUU1 101 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 A8MWV9 139 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 SEC11BP0C7V7 166 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 S100A1P23297 94 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 RHOHQ15669 191 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 FMC1Q96HJ9 113 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 MDFICQ9P1T7 246 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 A0A0D9SG52 128 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 EVI2AP22794 236 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 TNP2Q05952 138 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 HYLS1Q96M11 299 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 C8orf49Q96NF6 230 aa7.13□□□□□ -1.27
CSDE1-217ENST00000534699 K7EQD1 137 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 RHODO00212 210 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 IGLV2-11P01706 119 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 MGST1P10620 155 aaKnown RBP7.12□□□□□ -1.27
CSDE1-217ENST00000534699 SUMO1P63165 101 aaKnown RBP7.12□□□□□ -1.27
CSDE1-217ENST00000534699 OR2T35Q8NGX2 323 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 TVP23CQ96ET8 276 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 LY96Q9Y6Y9 160 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 ERVFC1-1P60608 527 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 MUC21Q5SSG8 566 aa7.12□□□□□ -1.27
CSDE1-217ENST00000534699 C16orf90A8MZG2 172 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 FGF8P55075 233 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-217ENST00000534699 RPL7L1Q6DKI1 246 aaKnown RBP7.11□□□□□ -1.27
CSDE1-217ENST00000534699 KCNRGQ8N5I3 272 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 SYT8Q8NBV8 401 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 FXYD6-FXYD2A0A087WZ82 144 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 TRAV8-6A0A0B4J262 113 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 GYPEP15421 78 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 Q6ZRN7 208 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-217ENST00000534699 MBD3L1Q8WWY6 194 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 IL36BQ9NZH7 164 aa7.11□□□□□ -1.27
CSDE1-217ENST00000534699 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 GGTLC3B5MD39 225 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 PEX7O00628 323 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 GCGP01275 180 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 LINC01556Q5JQF7 62 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 ZNF479Q96JC4 524 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 A0A087WWC5 75 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 FAM74A7A6NL05 159 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 ASIPP42127 132 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 LAGE3Q14657 143 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 TOR2AQ5JU69 321 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 NTN5Q8WTR8 489 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-217ENST00000534699 MSRB1Q9NZV6 116 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 NAGKQ9UJ70 344 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 RPH3ALQ9UNE2 315 aa7.1□□□□□ -1.27
CSDE1-217ENST00000534699 GNRH2O43555 120 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 GNG5P63218 68 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 LELP1Q5T871 98 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 IFNA7P01567 189 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 LINC00315P59091 139 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms