RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 IGHV3-16A0A0C4DH30 117 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 FBLL1A6NHQ2 334 aaKnown RBP9.18□□□□□ -0.94
CAPN1-228ENST00000534373 GNRH2O43555 120 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 NXPH4O95158 308 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 Q5BKY6 102 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 INO80EQ8NBZ0 244 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-228ENST00000534373 OR2T35Q8NGX2 323 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 TVP23CQ96ET8 276 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 ZNF479Q96JC4 524 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 SDF2L1Q9HCN8 221 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 NAGKQ9UJ70 344 aa9.18□□□□□ -0.94
CAPN1-228ENST00000534373 LRP1BQ9NZR2 4599 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 TRAV9-2A0A087WT02 112 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 K7EQD1 137 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 CIDEAO60543 219 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 CXorf1O96002 111 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 TCRAP04437 139 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 GCHFRP30047 84 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 SRIP30626 198 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 SH2D6Q7Z4S9 175 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 OR4C5Q8NGB2 326 aa9.17□□□□□ -0.94
CAPN1-228ENST00000534373 PCNPQ8WW12 178 aaKnown RBP9.17□□□□□ -0.94
CAPN1-228ENST00000534373 ACTR3CQ9C0K3 210 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-228ENST00000534373 C9JCJ5 164 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 TAAR5O14804 337 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 TYMSP04818 313 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 SFTA3P0C7M3 94 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 LINC00315P59091 139 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 SUMO1P63165 101 aaKnown RBP9.16□□□□□ -0.94
CAPN1-228ENST00000534373 GNG5P63218 68 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 SPATA12Q7Z6I5 190 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 TXNDC17Q9BRA2 123 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 EPDR1Q9UM22 224 aa9.16□□□□□ -0.94
CAPN1-228ENST00000534373 BORCS7-ASMTA0A0B4J1R7 106 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 F6UZH7 168 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 SMLR1H3BR10 107 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 GYPEP15421 78 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 NFE4Q86UQ8 179 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 PSG8Q9UQ74 426 aa9.15□□□□□ -0.94
CAPN1-228ENST00000534373 PFN1P07737 140 aaKnown RBP9.14□□□□□ -0.95
CAPN1-228ENST00000534373 FLI1Q01543 452 aaPredicted RBP9.14□□□□□ -0.95
CAPN1-228ENST00000534373 ZFP69Q49AA0 526 aa9.14□□□□□ -0.95
CAPN1-228ENST00000534373 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
CAPN1-228ENST00000534373 CYB561D1Q8N8Q1 229 aa9.14□□□□□ -0.95
CAPN1-228ENST00000534373 TMEM75Q8N9X5 138 aa9.14□□□□□ -0.95
CAPN1-228ENST00000534373 PTH2Q96A98 100 aa9.14□□□□□ -0.95
CAPN1-228ENST00000534373 SH3BGRL3Q9H299 93 aa9.14□□□□□ -0.95
CAPN1-228ENST00000534373 BOLA1Q9Y3E2 137 aa9.14□□□□□ -0.95
CAPN1-228ENST00000534373 LY96Q9Y6Y9 160 aa9.14□□□□□ -0.95
CAPN1-228ENST00000534373 RNF222A6NCQ9 220 aa9.13□□□□□ -0.95
CAPN1-228ENST00000534373 GCGP01275 180 aa9.13□□□□□ -0.95
CAPN1-228ENST00000534373 IGLV2-11P01706 119 aa9.13□□□□□ -0.95
CAPN1-228ENST00000534373 TIRAPP58753 221 aa9.13□□□□□ -0.95
CAPN1-228ENST00000534373 SMUG1Q53HV7 270 aa9.13□□□□□ -0.95
CAPN1-228ENST00000534373 RPL7L1Q6DKI1 246 aaKnown RBP9.13□□□□□ -0.95
CAPN1-228ENST00000534373 SGK494Q96LW2 274 aa9.13□□□□□ -0.95
CAPN1-228ENST00000534373 NKX6-2Q9C056 277 aaPredicted RBP9.13□□□□□ -0.95
CAPN1-228ENST00000534373 HSPG2P98160 4391 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 GGTLC3B5MD39 225 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 G3V3Q6 166 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 EREGO14944 169 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 ARPC5O15511 151 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 DNAH10OSP0CZ25 163 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-228ENST00000534373 EVI2AP22794 236 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 ZNF80P51504 273 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-228ENST00000534373 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
CAPN1-228ENST00000534373 CTXND1A0A1B0GTU2 59 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 TRBV6-4A0A1B0GX49 114 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 RS1O15537 224 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 PPT1P50897 306 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 PIK3CD-AS1Q5SR53 167 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 PRNTQ86SH4 94 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 C9orf85Q96MD7 179 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
CAPN1-228ENST00000534373 hCG_2014768A0A024R1R8 64 aa9.1□□□□□ -0.95
CAPN1-228ENST00000534373 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
CAPN1-228ENST00000534373 CFAP126Q5VTH2 177 aa9.1□□□□□ -0.95
CAPN1-228ENST00000534373 HIST1H2BAQ96A08 127 aa9.1□□□□□ -0.95
CAPN1-228ENST00000534373 PRADC1Q9BSG0 188 aa9.1□□□□□ -0.95
CAPN1-228ENST00000534373 FABP5P3A8MUU1 101 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 IFNA7P01567 189 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 RHOHQ15669 191 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 ZNF726P1Q15940 193 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 AKR1C8PQ5T2L2 129 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 CDPF1Q6NVV7 123 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 WFDC10BQ8IUB3 73 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 SLC25A29Q8N8R3 303 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 MSRB1Q9NZV6 116 aa9.09□□□□□ -0.95
CAPN1-228ENST00000534373 MGST1P10620 155 aaKnown RBP9.08□□□□□ -0.96
CAPN1-228ENST00000534373 RNASE3P12724 160 aaKnown RBP9.08□□□□□ -0.96
CAPN1-228ENST00000534373 NHLRC2Q8NBF2 726 aa9.08□□□□□ -0.96
CAPN1-228ENST00000534373 TNFRSF18Q9Y5U5 241 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms