RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 AGRNO00468 2067 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 G3V318 75 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 GOSR1O95249 250 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 CD7P09564 240 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 SAMD5Q5TGI4 173 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 WFDC3Q8IUB2 231 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 CITED2Q99967 270 aaPredicted RBP3.32□□□□□ -1.88
CTSC-208ENST00000533897 SMIM2Q9BVW6 85 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 POLEQ07864 2286 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 TRAV40A0A0B4J280 105 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 CIDEAO60543 219 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 IGLV1-40P01703 118 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 UBE2D3P61077 147 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 UBE2D2P62837 147 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 UNQ9165/PRO28630Q6UXU0 137 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 BAALCQ8WXS3 180 aa3.32□□□□□ -1.88
CTSC-208ENST00000533897 NAA38Q9BRA0 125 aaKnown RBP3.32□□□□□ -1.88
CTSC-208ENST00000533897 FBN2P35556 2912 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 LGALS1P09382 135 aaKnown RBP3.31□□□□□ -1.88
CTSC-208ENST00000533897 PLNP26678 52 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 SAA4P35542 130 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 FHL3Q13643 280 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 ZC2HC1BQ5TFG8 222 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 GTF2H5Q6ZYL4 71 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 GTSCR1Q86UQ5 136 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 FAM223BA6NKX1 122 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 TMEM238C9JI98 176 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 F8VRH5 84 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 TRBV12-3P01733 135 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
CTSC-208ENST00000533897 C12orf74Q32Q52 190 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 FAM223AQ8IWN6 122 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 TPPP3Q9BW30 176 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 TEX48A0A1B0GUV7 120 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 K7ERU9 68 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 SMIM13P0DJ93 91 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 EFNA4P52798 201 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 COL12A1Q99715 3063 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 FOXC2Q99958 501 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 EDA2RQ9HAV5 297 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 SPCS1Q9Y6A9 102 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 CACNA1HO95180 2353 aa3.31□□□□□ -1.88
CTSC-208ENST00000533897 IGHV3OR16-8A0A075B7F1 116 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 FAM90A27PA6NNH2 459 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 NMUP48645 174 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 RIPPLY3P57055 190 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 PKDREJQ9NTG1 2253 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 F8W1H4 67 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 ORM1P02763 201 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 SCGB1A1P11684 91 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 RNF151Q2KHN1 245 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 RRN3P1Q2M238 152 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 C9orf139Q6ZV77 190 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 RPL39LQ96EH5 51 aaKnown RBP3.3□□□□□ -1.88
CTSC-208ENST00000533897 MYMXA0A1B0GTQ4 84 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 H3BUA1 57 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 H7C1H1 209 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 NDUFA4O00483 81 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 TSPEAR-AS2P59090 65 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 CFAP126Q5VTH2 177 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 CLEC19AQ6UXS0 136 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 C9orf85Q96MD7 179 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 TRBV6-5A0A0K0K1A5 114 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 A8MTW9 85 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 NPFFO15130 113 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 SUMO2P61956 95 aaKnown RBP3.3□□□□□ -1.88
CTSC-208ENST00000533897 SMIM15Q7Z3B0 74 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 EEF1AKMT3Q96AZ1 226 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 LINC00477Q96M19 166 aa3.3□□□□□ -1.88
CTSC-208ENST00000533897 NCBP2LA6PVI3 153 aaKnown RBP3.29□□□□□ -1.88
CTSC-208ENST00000533897 LGALS9O00182 355 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 IGHG2P01859 326 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 EDN2P20800 178 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 TCTAP57738 103 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 WFDC2Q14508 124 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 PLEKHB2Q96CS7 222 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 CDIP1Q9H305 208 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 IGHV3-66A0A0C4DH42 116 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 TRBV27A0A0K0K1C4 114 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 A6NDX4 124 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 M0QXV9 152 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 CCL21O00585 134 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 NFE4Q86UQ8 179 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 MYOZ3Q8TDC0 251 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 DLX4Q92988 240 aaPredicted RBP3.29□□□□□ -1.88
CTSC-208ENST00000533897 TIMD4Q96H15 378 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
CTSC-208ENST00000533897 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
CTSC-208ENST00000533897 IGHV1-69DA0A0B4J2H0 117 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 IGHV3-35A0A0C4DH35 117 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 S100A7P31151 101 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 ATP6V0E2Q8NHE4 81 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 ZNRF2Q8NHG8 242 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 RAB37Q96AX2 223 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 ODF3Q96PU9 254 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 VPS25Q9BRG1 176 aa3.29□□□□□ -1.88
CTSC-208ENST00000533897 ABCA1O95477 2261 aa3.28□□□□□ -1.88
CTSC-208ENST00000533897 A0A0J9YY99 117 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms