RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 Q8NA96 180 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 ZNF625Q96I27 306 aaPredicted RBP13.75□□□□□ -0.21
PHRF1-205ENST00000533464 TMEM141Q96I45 108 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
PHRF1-205ENST00000533464 VPREB3Q9UKI3 123 aa13.75□□□□□ -0.21
PHRF1-205ENST00000533464 TNCP24821 2201 aa13.74□□□□□ -0.21
PHRF1-205ENST00000533464 GOLGB1Q14789 3259 aaKnown RBP13.74□□□□□ -0.21
PHRF1-205ENST00000533464 J3QKU1 62 aa13.74□□□□□ -0.21
PHRF1-205ENST00000533464 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
PHRF1-205ENST00000533464 JPT2Q9H910 190 aa13.74□□□□□ -0.21
PHRF1-205ENST00000533464 AZU1P20160 251 aa13.74□□□□□ -0.21
PHRF1-205ENST00000533464 Q6ZPA2 131 aa13.74□□□□□ -0.21
PHRF1-205ENST00000533464 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
PHRF1-205ENST00000533464 FAM167A-AS1Q96KT0 104 aa13.74□□□□□ -0.21
PHRF1-205ENST00000533464 IGLV2-23P01705 113 aa13.74□□□□□ -0.21
PHRF1-205ENST00000533464 COL4A4P53420 1690 aaPredicted RBP13.73□□□□□ -0.21
PHRF1-205ENST00000533464 Q71RC1 249 aaPredicted RBP13.73□□□□□ -0.21
PHRF1-205ENST00000533464 GHRHP01286 108 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 CRIP3Q6Q6R5 217 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 Q8N9W7 124 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 GATD1Q8NB37 220 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 CFHR4Q92496 578 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 TMEM131Q92545 1883 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 IGHV3-38A0A0C4DH36 116 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 GAGE12BA1L429 117 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 GNRH2O43555 120 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 ZNRF2Q8NHG8 242 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 ATP6V0BQ99437 205 aa13.73□□□□□ -0.21
PHRF1-205ENST00000533464 SIGMAR1Q99720 223 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 CCDC168Q8NDH2 2452 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 HOXD3P31249 432 aaPredicted RBP13.72□□□□□ -0.21
PHRF1-205ENST00000533464 DEFB121Q5J5C9 76 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
PHRF1-205ENST00000533464 GAGE7O76087 117 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 GAGE12FP0CL80 117 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 GAGE12GP0CL81 117 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 GAGE12IP0CL82 117 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 MED12LQ86YW9 2145 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 Q8N7P7 452 aa13.72□□□□□ -0.21
PHRF1-205ENST00000533464 COX8AP10176 69 aa13.71□□□□□ -0.21
PHRF1-205ENST00000533464 SPRY2O43597 315 aa13.71□□□□□ -0.21
PHRF1-205ENST00000533464 ZFP36P26651 326 aaKnown RBP13.71□□□□□ -0.21
PHRF1-205ENST00000533464 C11orf1Q9H5F2 150 aa13.71□□□□□ -0.21
PHRF1-205ENST00000533464 TRAV8-4A0A0B4J246 113 aa13.71□□□□□ -0.21
PHRF1-205ENST00000533464 TEX22C9J3V5 150 aa13.71□□□□□ -0.21
PHRF1-205ENST00000533464 PRB1P04280 392 aa13.71□□□□□ -0.21
PHRF1-205ENST00000533464 C3orf56Q8N813 242 aa13.71□□□□□ -0.21
PHRF1-205ENST00000533464 PROP1O75360 226 aa13.71□□□□□ -0.22
PHRF1-205ENST00000533464 COA6Q5JTJ3 125 aaKnown RBP13.71□□□□□ -0.22
PHRF1-205ENST00000533464 MRPL53Q96EL3 112 aaKnown RBP13.7□□□□□ -0.22
PHRF1-205ENST00000533464 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 RBAKDNA6NC62 111 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 SS18Q15532 418 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 CDPF1Q6NVV7 123 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 LENEPQ9Y5L5 61 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 ARHGAP21Q5T5U3 1957 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 HIVEP2P31629 2446 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 F8VRH5 84 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 CST9LQ9H4G1 147 aa13.7□□□□□ -0.22
PHRF1-205ENST00000533464 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 NRGNQ92686 78 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 BUB3O43684 328 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 MAJINQ3KP22 176 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 C10orf105Q8TEF2 133 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 AJUBAQ96IF1 538 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 ZNF747Q9BV97 191 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 LEPROTO15243 131 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
PHRF1-205ENST00000533464 KLF5Q13887 457 aaPredicted RBP13.68□□□□□ -0.22
PHRF1-205ENST00000533464 C2orf82Q6UX34 121 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 HLA-DRB4P13762 266 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 HLA-DRB4X5D2U9 266 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 NCKAP5O14513 1909 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 TRBV25-1A0A075B6N4 114 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 INS-IGF2F8WCM5 200 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 LGALS1P09382 135 aaKnown RBP13.68□□□□□ -0.22
PHRF1-205ENST00000533464 FBXL19-AS1Q494R0 122 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 IGF2BP2-AS1Q96M15 143 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 FOXI2Q6ZQN5 318 aa13.68□□□□□ -0.22
PHRF1-205ENST00000533464 GATA1P15976 413 aaPredicted RBP13.67□□□□□ -0.22
PHRF1-205ENST00000533464 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
PHRF1-205ENST00000533464 NUPR1O60356 82 aa13.67□□□□□ -0.22
PHRF1-205ENST00000533464 TLN1Q9Y490 2541 aaKnown RBP13.67□□□□□ -0.22
PHRF1-205ENST00000533464 F5H768 121 aa13.67□□□□□ -0.22
PHRF1-205ENST00000533464 P0C879 139 aa13.67□□□□□ -0.22
PHRF1-205ENST00000533464 BRWD1-AS2P59051 145 aa13.67□□□□□ -0.22
PHRF1-205ENST00000533464 KMT2EQ8IZD2 1858 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 VWC2LB2RUY7 222 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 CGB3P0DN86 165 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 CGB7P0DN87 165 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 UTF1Q5T230 341 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 C22orf34Q6ZV56 151 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 C5orf56Q8N8D9 126 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 CRYGCP07315 174 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 MSRB1Q9NZV6 116 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 TRAV8-3A0A0A6YYJ7 113 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 DAD1P61803 113 aa13.66□□□□□ -0.22
PHRF1-205ENST00000533464 DEFB113Q30KQ7 82 aa13.65□□□□□ -0.22
PHRF1-205ENST00000533464 DAZAP2Q15038 168 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms