RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 K7EMI3 77 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 SAA4P35542 130 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 TOMM6Q96B49 74 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 C20orf78Q9BR46 151 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 WNK2Q9Y3S1 2297 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 A0A1B0GWB2 263 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 ATP5G2Q06055 141 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 ZNF479Q96JC4 524 aa12.66□□□□□ -0.38
CTSB-228ENST00000533455 IGF2RP11717 2491 aa12.65□□□□□ -0.38
CTSB-228ENST00000533455 F8W1H4 67 aa12.65□□□□□ -0.38
CTSB-228ENST00000533455 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
CTSB-228ENST00000533455 AGRNO00468 2067 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
CTSB-228ENST00000533455 C19orf54Q5BKX5 351 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 NEXN-AS1Q8NBZ9 246 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 LINC00477Q96M19 166 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 CHTOPQ9Y3Y2 248 aaKnown RBP12.64□□□□□ -0.39
CTSB-228ENST00000533455 TLN1Q9Y490 2541 aaKnown RBP12.64□□□□□ -0.39
CTSB-228ENST00000533455 FAM223BA6NKX1 122 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 M0R381 172 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 MED14OSP0DP75 135 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 SUMO2P61956 95 aaKnown RBP12.64□□□□□ -0.39
CTSB-228ENST00000533455 FAM223AQ8IWN6 122 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 RASL10AQ92737 203 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 HIST1H4GQ99525 98 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 DPH3P1Q9H4G8 78 aa12.64□□□□□ -0.39
CTSB-228ENST00000533455 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
CTSB-228ENST00000533455 OR11H12B2RN74 326 aa12.63□□□□□ -0.39
CTSB-228ENST00000533455 CRIP2P52943 208 aaPredicted RBP12.63□□□□□ -0.39
CTSB-228ENST00000533455 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
CTSB-228ENST00000533455 OR11H2Q8NH07 326 aa12.63□□□□□ -0.39
CTSB-228ENST00000533455 SCGB3A1Q96QR1 104 aa12.63□□□□□ -0.39
CTSB-228ENST00000533455 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
CTSB-228ENST00000533455 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
CTSB-228ENST00000533455 SPANXB1Q9NS25 103 aaPredicted RBP12.62□□□□□ -0.39
CTSB-228ENST00000533455 LRBAP50851 2863 aa12.62□□□□□ -0.39
CTSB-228ENST00000533455 OVOL1O14753 267 aa12.62□□□□□ -0.39
CTSB-228ENST00000533455 NPFFO15130 113 aa12.62□□□□□ -0.39
CTSB-228ENST00000533455 GPHB5Q86YW7 130 aa12.62□□□□□ -0.39
CTSB-228ENST00000533455 PTPRQQ9UMZ3 2332 aa12.62□□□□□ -0.39
CTSB-228ENST00000533455 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
CTSB-228ENST00000533455 SOCS3O14543 225 aa12.61□□□□□ -0.39
CTSB-228ENST00000533455 IGF1P05019 195 aa12.61□□□□□ -0.39
CTSB-228ENST00000533455 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
CTSB-228ENST00000533455 ASIPP42127 132 aa12.61□□□□□ -0.39
CTSB-228ENST00000533455 HRNRQ86YZ3 2850 aaPredicted RBP12.6□□□□□ -0.39
CTSB-228ENST00000533455 A0A1W2PPR1 153 aa12.6□□□□□ -0.39
CTSB-228ENST00000533455 OR10J6PQ8NGY7 276 aa12.6□□□□□ -0.39
CTSB-228ENST00000533455 FAM19A4Q96LR4 140 aa12.6□□□□□ -0.39
CTSB-228ENST00000533455 MOB4Q9Y3A3 225 aa12.6□□□□□ -0.39
CTSB-228ENST00000533455 ARL3P36405 182 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 LMO4P61968 165 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 KLRB1Q12918 225 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 WFDC2Q14508 124 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 APRG1Q8IVJ8 170 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 BAALCQ8WXS3 180 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
CTSB-228ENST00000533455 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 LGALS1P09382 135 aaKnown RBP12.59□□□□□ -0.39
CTSB-228ENST00000533455 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
CTSB-228ENST00000533455 NDUFA4O00483 81 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 PPP1R17O96001 155 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 SCGB1A1P11684 91 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 S100A4P26447 101 aaKnown RBP12.58□□□□□ -0.4
CTSB-228ENST00000533455 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 KLK15Q9H2R5 256 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 PRO0461Q9UI25 63 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 RAXQ9Y2V3 346 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 PHLDA3Q9Y5J5 127 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 CSMD1Q96PZ7 3565 aa12.58□□□□□ -0.4
CTSB-228ENST00000533455 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
CTSB-228ENST00000533455 H3BMG7 143 aa12.57□□□□□ -0.4
CTSB-228ENST00000533455 J3QR89 54 aa12.57□□□□□ -0.4
CTSB-228ENST00000533455 C14orf178Q8N769 122 aaPredicted RBP12.57□□□□□ -0.4
CTSB-228ENST00000533455 J3KRW8 73 aa12.57□□□□□ -0.4
CTSB-228ENST00000533455 NXPH4O95158 308 aa12.57□□□□□ -0.4
CTSB-228ENST00000533455 SAMD13Q5VXD3 122 aa12.57□□□□□ -0.4
CTSB-228ENST00000533455 CHD8Q9HCK8 2581 aa12.56□□□□□ -0.4
CTSB-228ENST00000533455 MORN3Q6PF18 240 aaPredicted RBP12.56□□□□□ -0.4
CTSB-228ENST00000533455 UNQ9165/PRO28630Q6UXU0 137 aa12.56□□□□□ -0.4
CTSB-228ENST00000533455 PRADC1Q9BSG0 188 aa12.56□□□□□ -0.4
CTSB-228ENST00000533455 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 MGPP08493 103 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 RPL32P62910 135 aaKnown RBP12.55□□□□□ -0.4
CTSB-228ENST00000533455 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
CTSB-228ENST00000533455 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 NCOR2Q9Y618 2525 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 SPRY2O43597 315 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 BRI3O95415 125 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 RNASE3P12724 160 aaKnown RBP12.55□□□□□ -0.4
CTSB-228ENST00000533455 GAGE13Q4V321 117 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 BPESC1Q9GZL8 116 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 CYSLTR1Q9Y271 337 aa12.55□□□□□ -0.4
CTSB-228ENST00000533455 IGHV1-69DA0A0B4J2H0 117 aa12.54□□□□□ -0.4
CTSB-228ENST00000533455 HOXA3O43365 443 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms