RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 SDF2L1Q9HCN8 221 aa10.67□□□□□ -0.7
CHMP4A-204ENST00000530996 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
CHMP4A-204ENST00000530996 FBLL1A6NHQ2 334 aaKnown RBP10.66□□□□□ -0.7
CHMP4A-204ENST00000530996 H0YIZ8 118 aa10.66□□□□□ -0.7
CHMP4A-204ENST00000530996 GNRH2O43555 120 aa10.66□□□□□ -0.7
CHMP4A-204ENST00000530996 PET100P0DJ07 73 aa10.66□□□□□ -0.7
CHMP4A-204ENST00000530996 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
CHMP4A-204ENST00000530996 Q6ZSN1 163 aa10.66□□□□□ -0.7
CHMP4A-204ENST00000530996 TRAV8-6A0A0B4J262 113 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 PGPA6NDG6 321 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 TYMSP04818 313 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 TDRG1Q3Y452 100 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 PPP1R1CQ8WVI7 109 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 TMED6Q8WW62 240 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 NDFIP1Q9BT67 221 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 TREM1Q9NP99 234 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 NDUFA13Q9P0J0 144 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
CHMP4A-204ENST00000530996 TRAV8-1A0A0A6YYK1 113 aa10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 A0A1W2PPV4 95 aa10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 GNG5P63218 68 aa10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 NTN5Q8WTR8 489 aaPredicted RBP10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 ASB13Q8WXK3 278 aa10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 KCNS1Q96KK3 526 aa10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 PRADC1Q9BSG0 188 aa10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 MBD2Q9UBB5 411 aa10.64□□□□□ -0.71
CHMP4A-204ENST00000530996 IGHV3-73A0A0B4J1V6 119 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 SSNA1O43805 119 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 LINC01556Q5JQF7 62 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 S100ZQ8WXG8 99 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 TMEM70Q9BUB7 260 aa10.63□□□□□ -0.71
CHMP4A-204ENST00000530996 PFN1P07737 140 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-204ENST00000530996 RPL12P30050 165 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-204ENST00000530996 H2BFSP57053 126 aa10.62□□□□□ -0.71
CHMP4A-204ENST00000530996 TIRAPP58753 221 aa10.62□□□□□ -0.71
CHMP4A-204ENST00000530996 RHOHQ15669 191 aa10.62□□□□□ -0.71
CHMP4A-204ENST00000530996 ACOT6Q3I5F7 207 aaPredicted RBP10.62□□□□□ -0.71
CHMP4A-204ENST00000530996 PQLC2Q6ZP29 291 aa10.62□□□□□ -0.71
CHMP4A-204ENST00000530996 INMT-MINDY4F8WBC2 141 aa10.61□□□□□ -0.71
CHMP4A-204ENST00000530996 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
CHMP4A-204ENST00000530996 RAB2AP61019 212 aa10.61□□□□□ -0.71
CHMP4A-204ENST00000530996 ZNF876PQ49A33 203 aa10.61□□□□□ -0.71
CHMP4A-204ENST00000530996 Q8N814 137 aa10.61□□□□□ -0.71
CHMP4A-204ENST00000530996 SLC25A29Q8N8R3 303 aa10.61□□□□□ -0.71
CHMP4A-204ENST00000530996 SGK494Q96LW2 274 aa10.61□□□□□ -0.71
CHMP4A-204ENST00000530996 LRCOL1A6NCL2 159 aa10.6□□□□□ -0.71
CHMP4A-204ENST00000530996 UPK1BO75841 260 aa10.6□□□□□ -0.71
CHMP4A-204ENST00000530996 MPC2O95563 127 aa10.6□□□□□ -0.71
CHMP4A-204ENST00000530996 ZFP69Q49AA0 526 aa10.6□□□□□ -0.71
CHMP4A-204ENST00000530996 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
CHMP4A-204ENST00000530996 J3QL48 77 aa10.59□□□□□ -0.71
CHMP4A-204ENST00000530996 K7EQM0 130 aa10.59□□□□□ -0.71
CHMP4A-204ENST00000530996 CFAP126Q5VTH2 177 aa10.59□□□□□ -0.71
CHMP4A-204ENST00000530996 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
CHMP4A-204ENST00000530996 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
CHMP4A-204ENST00000530996 ARL14EPLP0DKL9 152 aa10.58□□□□□ -0.72
CHMP4A-204ENST00000530996 LELP1Q5T871 98 aa10.58□□□□□ -0.72
CHMP4A-204ENST00000530996 OR10G9Q8NGN4 311 aa10.58□□□□□ -0.72
CHMP4A-204ENST00000530996 OR10G7Q8NGN6 311 aa10.58□□□□□ -0.72
CHMP4A-204ENST00000530996 FAT1Q14517 4588 aa10.58□□□□□ -0.72
CHMP4A-204ENST00000530996 MYCBP2O75592 4640 aa10.58□□□□□ -0.72
CHMP4A-204ENST00000530996 SERTM2A0A1B0GWG4 89 aa10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 RS1O15537 224 aa10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 GCGP01275 180 aa10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 CDC34P49427 236 aaPredicted RBP10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
CHMP4A-204ENST00000530996 TAAR5O14804 337 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 CIDEAO60543 219 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 ZNF506Q5JVG8 444 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 DPPA3Q6W0C5 159 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 C5orf17Q8NAS9 161 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 TM2D2Q9BX73 214 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 WFDC1Q9HC57 220 aa10.56□□□□□ -0.72
CHMP4A-204ENST00000530996 FLG2Q5D862 2391 aaPredicted RBP10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 LECT2O14960 151 aa10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 LAGE3Q14657 143 aa10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 LINC00299Q6ZSB3 139 aa10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 HSD17B11Q8NBQ5 300 aa10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 VPS13BQ7Z7G8 4022 aa10.55□□□□□ -0.72
CHMP4A-204ENST00000530996 GAGE12JA6NER3 117 aa10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 TCRAP04437 139 aa10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 S100A4P26447 101 aaKnown RBP10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 GAGE1Q13065 139 aa10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 GAGE4Q13068 117 aa10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 GAGE5Q13069 117 aa10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 GAGE13Q4V321 117 aa10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
CHMP4A-204ENST00000530996 PRNTQ86SH4 94 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms