RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TIMM8BQ9Y5J9 83 aaPredicted RBP7.75□□□□□ -1.17
SOX6-213ENST00000530378 C19orf71A6NCJ1 209 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 FABP5P3A8MUU1 101 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 GATCO43716 136 aaKnown RBP7.75□□□□□ -1.17
SOX6-213ENST00000530378 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
SOX6-213ENST00000530378 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 OR10G8Q8NGN5 311 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 RPS10P5Q9NQ39 176 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 DNAH9Q9NYC9 4486 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 HUWE1Q7Z6Z7 4374 aaKnown RBP7.74□□□□□ -1.17
SOX6-213ENST00000530378 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 C7orf77A4D0Y5 90 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 TMEM189A5PLL7 270 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 B4DEV8 164 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 SCO1O75880 301 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 SSTP61278 116 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 C15orf54Q8N8G6 183 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 CSNK1G2-AS1Q8NCQ2 148 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 TPPP3Q9BW30 176 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 C1QTNF4Q9BXJ3 329 aa7.74□□□□□ -1.17
SOX6-213ENST00000530378 RPP21Q9H633 154 aaKnown RBP7.74□□□□□ -1.17
SOX6-213ENST00000530378 IGHV1OR15-1A0A075B7D0 117 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 MUC21A0A0G2JKD1 596 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 MUC21A0A140T8X8 626 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 CBY3A6NI87 242 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 GNRH2O43555 120 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 SNAPINO95295 136 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 AMBPP02760 352 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 DEFA6Q01524 100 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 FAM159AQ6UWV7 190 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 BIN3Q9NQY0 253 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 GOLT1BQ9Y3E0 138 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 V9GYV3 84 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 KIR2DL5BA0A0G2JN68 375 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 KIR2DL5BA0A0G2JPC4 375 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 H7BYZ3 331 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 TYMSP04818 313 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 KIR2DL5AQ8N109 375 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 KIR2DL5BQ8NHK3 375 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 OSTCQ9NRP0 149 aa7.73□□□□□ -1.17
SOX6-213ENST00000530378 H3BVH4 76 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 DEFB4AO15263 64 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 MT-ND4LP03901 98 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 AZU1P20160 251 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 FAM231DQ6ZW35 169 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 SBSPONQ8IVN8 264 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 SVIPQ8NHG7 77 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 MUC4Q99102 2169 aa7.72□□□□□ -1.17
SOX6-213ENST00000530378 COL7A1Q02388 2944 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 A8MZ25 164 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 SPINK4O60575 86 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 EMP1P54849 157 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 RHEBQ15382 184 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 TMEM88Q6PEY1 159 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 LINC00528Q8N1L1 170 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 MDFICQ9P1T7 246 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 URGCP-MRPS24S4R325 110 aa7.71□□□□□ -1.17
SOX6-213ENST00000530378 TGP01266 2768 aa7.71□□□□□ -1.18
SOX6-213ENST00000530378 S100A1P23297 94 aa7.71□□□□□ -1.18
SOX6-213ENST00000530378 ZNF575Q86XF7 245 aa7.71□□□□□ -1.18
SOX6-213ENST00000530378 CBLN2Q8IUK8 224 aa7.71□□□□□ -1.18
SOX6-213ENST00000530378 OR11H2Q8NH07 326 aa7.71□□□□□ -1.18
SOX6-213ENST00000530378 GTSF1Q8WW33 167 aa7.71□□□□□ -1.18
SOX6-213ENST00000530378 NEU1Q99519 415 aa7.71□□□□□ -1.18
SOX6-213ENST00000530378 S100A4P26447 101 aaKnown RBP7.7□□□□□ -1.18
SOX6-213ENST00000530378 ZNF705AQ6ZN79 300 aaPredicted RBP7.7□□□□□ -1.18
SOX6-213ENST00000530378 PYGO2Q9BRQ0 406 aa7.7□□□□□ -1.18
SOX6-213ENST00000530378 GSN-AS1Q9NRJ2 163 aa7.7□□□□□ -1.18
SOX6-213ENST00000530378 X6R8D5 127 aa7.7□□□□□ -1.18
SOX6-213ENST00000530378 BTF3P20290 206 aaKnown RBP7.69□□□□□ -1.18
SOX6-213ENST00000530378 ASIPP42127 132 aa7.69□□□□□ -1.18
SOX6-213ENST00000530378 FAM3BP58499 235 aaPredicted RBP7.69□□□□□ -1.18
SOX6-213ENST00000530378 TMEM256Q8N2U0 113 aa7.69□□□□□ -1.18
SOX6-213ENST00000530378 RNF183Q96D59 192 aa7.69□□□□□ -1.18
SOX6-213ENST00000530378 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
SOX6-213ENST00000530378 KCNS1Q96KK3 526 aa7.69□□□□□ -1.18
SOX6-213ENST00000530378 PGLYRP4Q96LB8 373 aa7.69□□□□□ -1.18
SOX6-213ENST00000530378 C20orf144Q9BQM9 153 aa7.69□□□□□ -1.18
SOX6-213ENST00000530378 IGHV3-16A0A0C4DH30 117 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 HIGD1CA8MV81 97 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 UBE2CO00762 179 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 PPP1R2P9O14990 202 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 ARMS2P0C7Q2 107 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 RRN3P1Q2M238 152 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 Q6ZWC4 215 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 LINC00469Q8N7U9 141 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 OR10AG1Q8NH19 301 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 TSKUQ8WUA8 353 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 OVOL2Q9BRP0 275 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 STAB2Q8WWQ8 2551 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 TRGV11A0A075B6L2 103 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 IGHV4-28A0A0C4DH34 117 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 A0A1W2PPQ1 181 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 A8MWL6 223 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 RNASE3P12724 160 aaKnown RBP7.68□□□□□ -1.18
SOX6-213ENST00000530378 TDRG1Q3Y452 100 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 LYZL1Q6UWQ5 148 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 FER1L6-AS1Q8NA97 138 aa7.68□□□□□ -1.18
SOX6-213ENST00000530378 IL36BQ9NZH7 164 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms