RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 Q9H8V8 135 aa22.86■■□□□ 1.25
SSSCA1-205ENST00000527920 SDF2L1Q9HCN8 221 aa22.86■■□□□ 1.25
SSSCA1-205ENST00000527920 FHL2Q14192 279 aa22.85■■□□□ 1.25
SSSCA1-205ENST00000527920 SGK494Q96LW2 274 aa22.85■■□□□ 1.25
SSSCA1-205ENST00000527920 KCNRGQ8N5I3 272 aa22.84■■□□□ 1.25
SSSCA1-205ENST00000527920 NKX6-2Q9C056 277 aaPredicted RBP22.84■■□□□ 1.25
SSSCA1-205ENST00000527920 ICOSQ9Y6W8 199 aa22.84■■□□□ 1.25
SSSCA1-205ENST00000527920 M0R2P5 195 aa22.83■■□□□ 1.25
SSSCA1-205ENST00000527920 GNRH2O43555 120 aa22.83■■□□□ 1.25
SSSCA1-205ENST00000527920 TYMSP04818 313 aa22.83■■□□□ 1.25
SSSCA1-205ENST00000527920 CRYBA4P53673 196 aa22.83■■□□□ 1.25
SSSCA1-205ENST00000527920 HHLA3Q9XRX5 114 aa22.83■■□□□ 1.25
SSSCA1-205ENST00000527920 SMLR1H3BR10 107 aa22.82■■□□□ 1.24
SSSCA1-205ENST00000527920 TTC32Q5I0X7 151 aa22.82■■□□□ 1.24
SSSCA1-205ENST00000527920 SAPCD1Q5SSQ6 148 aa22.82■■□□□ 1.24
SSSCA1-205ENST00000527920 HMSDA8MTL9 139 aa22.81■■□□□ 1.24
SSSCA1-205ENST00000527920 PFN1P07737 140 aaKnown RBP22.81■■□□□ 1.24
SSSCA1-205ENST00000527920 ZFP69Q49AA0 526 aa22.81■■□□□ 1.24
SSSCA1-205ENST00000527920 SMUG1Q53HV7 270 aa22.81■■□□□ 1.24
SSSCA1-205ENST00000527920 C8orf49Q96NF6 230 aa22.81■■□□□ 1.24
SSSCA1-205ENST00000527920 GCGP01275 180 aa22.8■■□□□ 1.24
SSSCA1-205ENST00000527920 ZNF80P51504 273 aaPredicted RBP22.8■■□□□ 1.24
SSSCA1-205ENST00000527920 PRNTQ86SH4 94 aa22.8■■□□□ 1.24
SSSCA1-205ENST00000527920 C6orf223Q8N319 242 aa22.8■■□□□ 1.24
SSSCA1-205ENST00000527920 TRAV4A0A0B4J268 109 aa22.79■■□□□ 1.24
SSSCA1-205ENST00000527920 TRGV4A0A0C4DH28 118 aa22.79■■□□□ 1.24
SSSCA1-205ENST00000527920 ZNF479Q96JC4 524 aa22.79■■□□□ 1.24
SSSCA1-205ENST00000527920 A0A1W2PPQ1 181 aa22.78■■□□□ 1.24
SSSCA1-205ENST00000527920 MAP1LC3B2A6NCE7 125 aa22.78■■□□□ 1.24
SSSCA1-205ENST00000527920 FAM74A7A6NL05 159 aa22.78■■□□□ 1.24
SSSCA1-205ENST00000527920 IFNA7P01567 189 aa22.78■■□□□ 1.24
SSSCA1-205ENST00000527920 PPT1P50897 306 aa22.78■■□□□ 1.24
SSSCA1-205ENST00000527920 MAP1LC3BQ9GZQ8 125 aa22.78■■□□□ 1.24
SSSCA1-205ENST00000527920 FGF8P55075 233 aaPredicted RBP22.77■■□□□ 1.24
SSSCA1-205ENST00000527920 MRPL23Q16540 153 aaKnown RBP22.77■■□□□ 1.24
SSSCA1-205ENST00000527920 OR11H4Q8NGC9 324 aa22.77■■□□□ 1.24
SSSCA1-205ENST00000527920 HIST1H2BAQ96A08 127 aa22.77■■□□□ 1.24
SSSCA1-205ENST00000527920 C11orf21Q9P2W6 132 aa22.77■■□□□ 1.24
SSSCA1-205ENST00000527920 SFTA3P0C7M3 94 aa22.76■■□□□ 1.23
SSSCA1-205ENST00000527920 UBE2G2P60604 165 aa22.76■■□□□ 1.23
SSSCA1-205ENST00000527920 A0A0D9SG52 128 aa22.75■■□□□ 1.23
SSSCA1-205ENST00000527920 PEX7O00628 323 aa22.75■■□□□ 1.23
SSSCA1-205ENST00000527920 SEC11BP0C7V7 166 aa22.75■■□□□ 1.23
SSSCA1-205ENST00000527920 BTF3P20290 206 aaKnown RBP22.75■■□□□ 1.23
SSSCA1-205ENST00000527920 STOML3Q8TAV4 291 aa22.75■■□□□ 1.23
SSSCA1-205ENST00000527920 PKHD1P08F94 4074 aa22.75■■□□□ 1.23
SSSCA1-205ENST00000527920 LINC00479Q96M42 142 aa22.74■■□□□ 1.23
SSSCA1-205ENST00000527920 TCEAL7Q9BRU2 100 aa22.74■■□□□ 1.23
SSSCA1-205ENST00000527920 ARL2-SNX15V9GYD0 113 aa22.74■■□□□ 1.23
SSSCA1-205ENST00000527920 ORM1P02763 201 aa22.73■■□□□ 1.23
SSSCA1-205ENST00000527920 OR4C5Q8NGB2 326 aa22.73■■□□□ 1.23
SSSCA1-205ENST00000527920 TRAV34A0A0B4J273 112 aa22.72■■□□□ 1.23
SSSCA1-205ENST00000527920 UMAD1C9J7I0 102 aa22.72■■□□□ 1.23
SSSCA1-205ENST00000527920 FHITP49789 147 aa22.72■■□□□ 1.23
SSSCA1-205ENST00000527920 KRTAP1-5Q9BYS1 174 aa22.72■■□□□ 1.23
SSSCA1-205ENST00000527920 BCL2L11O43521 198 aa22.71■■□□□ 1.23
SSSCA1-205ENST00000527920 NEGR1Q7Z3B1 354 aa22.71■■□□□ 1.23
SSSCA1-205ENST00000527920 Q86TA4 180 aa22.71■■□□□ 1.23
SSSCA1-205ENST00000527920 PTH2Q96A98 100 aa22.71■■□□□ 1.23
SSSCA1-205ENST00000527920 C9orf85Q96MD7 179 aa22.71■■□□□ 1.23
SSSCA1-205ENST00000527920 PKD1P98161 4303 aa22.69■■□□□ 1.22
SSSCA1-205ENST00000527920 KANTRA0A1W2PQU2 76 aa22.69■■□□□ 1.22
SSSCA1-205ENST00000527920 K7EQD1 137 aa22.69■■□□□ 1.22
SSSCA1-205ENST00000527920 PCNPQ8WW12 178 aaKnown RBP22.69■■□□□ 1.22
SSSCA1-205ENST00000527920 DNAH11Q96DT5 4516 aa22.69■■□□□ 1.22
SSSCA1-205ENST00000527920 C9JCJ5 164 aa22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 CIDEAO60543 219 aa22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 SRIP30626 198 aa22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 EIF5AP63241 154 aaKnown RBP22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 ZNF876PQ49A33 203 aa22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 LYPD5Q6UWN5 251 aa22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 COX8CQ7Z4L0 72 aa22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 ZNF471Q9BX82 626 aaPredicted RBP22.68■■□□□ 1.22
SSSCA1-205ENST00000527920 HERC2O95714 4834 aa22.67■■□□□ 1.22
SSSCA1-205ENST00000527920 SIVA1O15304 175 aa22.67■■□□□ 1.22
SSSCA1-205ENST00000527920 GYPEP15421 78 aa22.67■■□□□ 1.22
SSSCA1-205ENST00000527920 TNP2Q05952 138 aa22.67■■□□□ 1.22
SSSCA1-205ENST00000527920 MBD3L1Q8WWY6 194 aa22.67■■□□□ 1.22
SSSCA1-205ENST00000527920 ZFP30Q9Y2G7 519 aa22.67■■□□□ 1.22
SSSCA1-205ENST00000527920 FABP5P3A8MUU1 101 aa22.66■■□□□ 1.22
SSSCA1-205ENST00000527920 NXPH4O95158 308 aa22.66■■□□□ 1.22
SSSCA1-205ENST00000527920 DPPA3Q6W0C5 159 aa22.66■■□□□ 1.22
SSSCA1-205ENST00000527920 FMC1Q96HJ9 113 aa22.66■■□□□ 1.22
SSSCA1-205ENST00000527920 RNASE3P12724 160 aaKnown RBP22.65■■□□□ 1.22
SSSCA1-205ENST00000527920 GATA1P15976 413 aaPredicted RBP22.65■■□□□ 1.22
SSSCA1-205ENST00000527920 KIAA1109Q2LD37 5005 aa22.65■■□□□ 1.22
SSSCA1-205ENST00000527920 TRBV6-1A0A0K0K1D8 114 aa22.64■■□□□ 1.21
SSSCA1-205ENST00000527920 TXNDC17Q9BRA2 123 aa22.64■■□□□ 1.21
SSSCA1-205ENST00000527920 IGKV3D-20A0A0C4DH25 116 aa22.63■■□□□ 1.21
SSSCA1-205ENST00000527920 CST9LP1Q5W188 147 aa22.63■■□□□ 1.21
SSSCA1-205ENST00000527920 SH2D6Q7Z4S9 175 aa22.63■■□□□ 1.21
SSSCA1-205ENST00000527920 FAM213BQ8TBF2 198 aa22.63■■□□□ 1.21
SSSCA1-205ENST00000527920 RS1O15537 224 aa22.62■■□□□ 1.21
SSSCA1-205ENST00000527920 PIK3CD-AS1Q5SR53 167 aa22.62■■□□□ 1.21
SSSCA1-205ENST00000527920 CFAP126Q5VTH2 177 aa22.62■■□□□ 1.21
SSSCA1-205ENST00000527920 SFT2D1Q8WV19 159 aa22.62■■□□□ 1.21
SSSCA1-205ENST00000527920 UBE2G1P62253 170 aa22.61■■□□□ 1.21
SSSCA1-205ENST00000527920 DYNC1H1Q14204 4646 aaKnown RBP22.61■■□□□ 1.21
SSSCA1-205ENST00000527920 MED14OSP0DP75 135 aa22.6■■□□□ 1.21
SSSCA1-205ENST00000527920 ZNF506Q5JVG8 444 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms