RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ZNF479Q96JC4 524 aa13.29□□□□□ -0.28
CAPN1-211ENST00000527739 TNFSF18Q9UNG2 199 aa13.29□□□□□ -0.28
CAPN1-211ENST00000527739 TCRAP04437 139 aa13.28□□□□□ -0.28
CAPN1-211ENST00000527739 MRPL23Q16540 153 aaKnown RBP13.28□□□□□ -0.28
CAPN1-211ENST00000527739 RGS21Q2M5E4 152 aa13.28□□□□□ -0.28
CAPN1-211ENST00000527739 RASL10AQ92737 203 aa13.28□□□□□ -0.28
CAPN1-211ENST00000527739 KRTAP1-5Q9BYS1 174 aa13.28□□□□□ -0.28
CAPN1-211ENST00000527739 SDF2L1Q9HCN8 221 aa13.28□□□□□ -0.28
CAPN1-211ENST00000527739 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
CAPN1-211ENST00000527739 SERTM2A0A1B0GWG4 89 aa13.27□□□□□ -0.29
CAPN1-211ENST00000527739 RNF222A6NCQ9 220 aa13.27□□□□□ -0.29
CAPN1-211ENST00000527739 OR4C5Q8NGB2 326 aa13.27□□□□□ -0.29
CAPN1-211ENST00000527739 EPDR1Q9UM22 224 aa13.27□□□□□ -0.29
CAPN1-211ENST00000527739 IGHV3-16A0A0C4DH30 117 aa13.26□□□□□ -0.29
CAPN1-211ENST00000527739 M0R2P5 195 aa13.26□□□□□ -0.29
CAPN1-211ENST00000527739 TDRG1Q3Y452 100 aa13.26□□□□□ -0.29
CAPN1-211ENST00000527739 PRNTQ86SH4 94 aa13.26□□□□□ -0.29
CAPN1-211ENST00000527739 PCNPQ8WW12 178 aaKnown RBP13.26□□□□□ -0.29
CAPN1-211ENST00000527739 KCNS1Q96KK3 526 aa13.26□□□□□ -0.29
CAPN1-211ENST00000527739 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
CAPN1-211ENST00000527739 PSG8Q9UQ74 426 aa13.26□□□□□ -0.29
CAPN1-211ENST00000527739 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
CAPN1-211ENST00000527739 SIVA1O15304 175 aa13.25□□□□□ -0.29
CAPN1-211ENST00000527739 NXPH4O95158 308 aa13.25□□□□□ -0.29
CAPN1-211ENST00000527739 TYMSP04818 313 aa13.25□□□□□ -0.29
CAPN1-211ENST00000527739 NEGR1Q7Z3B1 354 aa13.25□□□□□ -0.29
CAPN1-211ENST00000527739 SUN5Q8TC36 379 aa13.25□□□□□ -0.29
CAPN1-211ENST00000527739 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 GGTLC3B5MD39 225 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 C9JCJ5 164 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 IFNA7P01567 189 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 GYPEP15421 78 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 SRIP30626 198 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 FLI1Q01543 452 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-211ENST00000527739 ZFP69Q49AA0 526 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 AKR1C8PQ5T2L2 129 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 LYPD5Q6UWN5 251 aa13.24□□□□□ -0.29
CAPN1-211ENST00000527739 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
CAPN1-211ENST00000527739 TAAR5O14804 337 aa13.23□□□□□ -0.29
CAPN1-211ENST00000527739 ARPC5O15511 151 aa13.23□□□□□ -0.29
CAPN1-211ENST00000527739 GCGP01275 180 aa13.23□□□□□ -0.29
CAPN1-211ENST00000527739 ZNF80P51504 273 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-211ENST00000527739 UBE2G2P60604 165 aa13.23□□□□□ -0.29
CAPN1-211ENST00000527739 CYB561D1Q8N8Q1 229 aa13.23□□□□□ -0.29
CAPN1-211ENST00000527739 CTXND1A0A1B0GTU2 59 aa13.22□□□□□ -0.29
CAPN1-211ENST00000527739 K7EQD1 137 aa13.22□□□□□ -0.29
CAPN1-211ENST00000527739 SMUG1Q53HV7 270 aa13.22□□□□□ -0.29
CAPN1-211ENST00000527739 TRAV34A0A0B4J273 112 aa13.21□□□□□ -0.29
CAPN1-211ENST00000527739 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
CAPN1-211ENST00000527739 ORM1P02763 201 aa13.21□□□□□ -0.29
CAPN1-211ENST00000527739 FGF8P55075 233 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-211ENST00000527739 ZNF726P1Q15940 193 aa13.21□□□□□ -0.29
CAPN1-211ENST00000527739 LINC00479Q96M42 142 aa13.21□□□□□ -0.29
CAPN1-211ENST00000527739 SMLR1H3BR10 107 aa13.2□□□□□ -0.3
CAPN1-211ENST00000527739 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
CAPN1-211ENST00000527739 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
CAPN1-211ENST00000527739 LINC00315P59091 139 aa13.2□□□□□ -0.3
CAPN1-211ENST00000527739 ZNF876PQ49A33 203 aa13.2□□□□□ -0.3
CAPN1-211ENST00000527739 SAPCD1Q5SSQ6 148 aa13.2□□□□□ -0.3
CAPN1-211ENST00000527739 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
CAPN1-211ENST00000527739 C11orf21Q9P2W6 132 aa13.2□□□□□ -0.3
CAPN1-211ENST00000527739 PPT1P50897 306 aa13.19□□□□□ -0.3
CAPN1-211ENST00000527739 SPATA12Q7Z6I5 190 aa13.19□□□□□ -0.3
CAPN1-211ENST00000527739 NHLRC2Q8NBF2 726 aa13.19□□□□□ -0.3
CAPN1-211ENST00000527739 TXNDC17Q9BRA2 123 aa13.19□□□□□ -0.3
CAPN1-211ENST00000527739 LOC100131303A0A0U1RQF7 123 aa13.18□□□□□ -0.3
CAPN1-211ENST00000527739 FBLL1A6NHQ2 334 aaKnown RBP13.18□□□□□ -0.3
CAPN1-211ENST00000527739 APOBP04114 4563 aaKnown RBP13.18□□□□□ -0.3
CAPN1-211ENST00000527739 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
CAPN1-211ENST00000527739 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
CAPN1-211ENST00000527739 G3V3Q6 166 aa13.17□□□□□ -0.3
CAPN1-211ENST00000527739 BTF3P20290 206 aaKnown RBP13.17□□□□□ -0.3
CAPN1-211ENST00000527739 LY96Q9Y6Y9 160 aa13.17□□□□□ -0.3
CAPN1-211ENST00000527739 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
CAPN1-211ENST00000527739 PEX7O00628 323 aa13.16□□□□□ -0.3
CAPN1-211ENST00000527739 S100A4P26447 101 aaKnown RBP13.16□□□□□ -0.3
CAPN1-211ENST00000527739 MAP1LC3BQ9GZQ8 125 aa13.16□□□□□ -0.3
CAPN1-211ENST00000527739 CYTL1Q9NRR1 136 aa13.16□□□□□ -0.3
CAPN1-211ENST00000527739 TNFRSF18Q9Y5U5 241 aa13.16□□□□□ -0.3
CAPN1-211ENST00000527739 ARL2-SNX15V9GYD0 113 aa13.16□□□□□ -0.3
CAPN1-211ENST00000527739 FAM74A7A6NL05 159 aa13.15□□□□□ -0.3
CAPN1-211ENST00000527739 GATA1P15976 413 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-211ENST00000527739 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.3
CAPN1-211ENST00000527739 STOML3Q8TAV4 291 aa13.15□□□□□ -0.3
CAPN1-211ENST00000527739 NKX6-2Q9C056 277 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-211ENST00000527739 DNAH5Q8TE73 4624 aa13.14□□□□□ -0.31
CAPN1-211ENST00000527739 PGPEP1LA6NFU8 196 aa13.14□□□□□ -0.31
CAPN1-211ENST00000527739 FABP5P3A8MUU1 101 aa13.14□□□□□ -0.31
CAPN1-211ENST00000527739 RS1O15537 224 aa13.14□□□□□ -0.31
CAPN1-211ENST00000527739 CFAP126Q5VTH2 177 aa13.14□□□□□ -0.31
CAPN1-211ENST00000527739 DPPA3Q6W0C5 159 aa13.14□□□□□ -0.31
CAPN1-211ENST00000527739 EVI2AP22794 236 aa13.13□□□□□ -0.31
CAPN1-211ENST00000527739 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
CAPN1-211ENST00000527739 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
CAPN1-211ENST00000527739 SH2D6Q7Z4S9 175 aa13.13□□□□□ -0.31
CAPN1-211ENST00000527739 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
CAPN1-211ENST00000527739 C9orf85Q96MD7 179 aa13.13□□□□□ -0.31
CAPN1-211ENST00000527739 PRADC1Q9BSG0 188 aa13.13□□□□□ -0.31
CAPN1-211ENST00000527739 Q86TA4 180 aa13.12□□□□□ -0.31
CAPN1-211ENST00000527739 SLC25A29Q8N8R3 303 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms