RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 HIGD1CA8MV81 97 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 APCSP02743 223 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 VPREB1P12018 145 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 ID1P41134 155 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 CDX1P47902 265 aaPredicted RBP4.89□□□□□ -1.63
LINC00534-203ENST00000523406 KRTAP10-11P60412 298 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 ERCC8Q13216 396 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 SMUG1Q53HV7 270 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 SAMD13Q5VXD3 122 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 RBPMS2Q6ZRY4 209 aaKnown RBP4.89□□□□□ -1.63
LINC00534-203ENST00000523406 KLHDC1Q8N7A1 406 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 NUP35Q8NFH5 326 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 ZNF418Q8TF45 676 aaPredicted RBP4.89□□□□□ -1.63
LINC00534-203ENST00000523406 BORCS7Q96B45 105 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 PGLYRP4Q96LB8 373 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 UBE2E2Q96LR5 201 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 ASCL2Q99929 193 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 VGLL1Q99990 258 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 C1QTNF4Q9BXJ3 329 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 GFRA4Q9GZZ7 299 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 NRN1Q9NPD7 142 aa4.89□□□□□ -1.63
LINC00534-203ENST00000523406 MTORP42345 2549 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 VPS13CQ709C8 3753 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 IGKV3-7A0A075B6H7 116 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 TRAV8-2A0A0B4J237 113 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 FAM231BA6NCW3 169 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 PRAC2D3DTV9 90 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 OVOL1O14753 267 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 PHOX2AO14813 284 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 SH2D1AO60880 128 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 HLA-DQA1P01909 254 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 S100A8P05109 93 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 ZNF138P52744 262 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 SYNJ2BPP57105 145 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 RPS20P60866 119 aaKnown RBP4.88□□□□□ -1.63
LINC00534-203ENST00000523406 RASL11AQ6T310 242 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 LINC00322Q6ZN03 302 aaPredicted RBP4.88□□□□□ -1.63
LINC00534-203ENST00000523406 TCF24Q7RTU0 167 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 ATP5L2Q7Z4Y8 100 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 OR10J6PQ8NGY7 276 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 Q8TAT8 98 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 MYOZ3Q8TDC0 251 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 TPPP3Q9BW30 176 aa4.88□□□□□ -1.63
LINC00534-203ENST00000523406 PDZD2O15018 2839 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 HIVEP2P31629 2446 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 A0A087WW49 117 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 TMSB15BA0A087X1C1 80 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 FABP5P3A8MUU1 101 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 LINC01619G3V211 115 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 LGALS9O00182 355 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 ORM1P02763 201 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 GZMBP10144 247 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 CRISP2P16562 243 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 HBBP68871 147 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 KRTAP1-1Q07627 177 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 RIGQ13278 110 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 PDZD11Q5EBL8 140 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 Q6AWC8 147 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 TMEM136Q6ZRR5 245 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 BAGE3Q86Y29 109 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 OR1N2Q8NGR9 330 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 GPR61Q9BZJ8 451 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 AGPAT4-IT1Q9H0P7 198 aa4.87□□□□□ -1.63
LINC00534-203ENST00000523406 SVEP1Q4LDE5 3571 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 SETXQ7Z333 2677 aaKnown RBP4.86□□□□□ -1.63
LINC00534-203ENST00000523406 A0A1B0GUT8 65 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 A0A1B0GW15 77 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 FRMD6-AS1P0C7T7 363 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 FABP4P15090 132 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 TFPI2P48307 235 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 CRIP1P50238 77 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 SNRPD3P62318 126 aaKnown RBP4.86□□□□□ -1.63
LINC00534-203ENST00000523406 PAFAH1B2P68402 229 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 HIST1H1AQ02539 215 aaPredicted RBP4.86□□□□□ -1.63
LINC00534-203ENST00000523406 KIAA1644Q3SXP7 199 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 GFI1BQ5VTD9 330 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 Q71RC1 249 aaPredicted RBP4.86□□□□□ -1.63
LINC00534-203ENST00000523406 COX8CQ7Z4L0 72 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 HIST3H2BBQ8N257 126 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 KLHL30-AS1Q8NEE0 82 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 C4orf3Q8WVX3 66 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 GTSF1Q8WW33 167 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 LINC00477Q96M19 166 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 SELENOKQ9Y6D0 94 aa4.86□□□□□ -1.63
LINC00534-203ENST00000523406 SETD2Q9BYW2 2564 aaPredicted RBP4.85□□□□□ -1.63
LINC00534-203ENST00000523406 A0A1B0GUV1 79 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 TMEM213A2RRL7 107 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 GRIFINA4D1Z8 144 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 C2orf70A6NJV1 201 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 A8MWP6 167 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 SOCS3O14543 225 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 LY6G6DO95868 133 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 ZNF705DP0CH99 300 aaPredicted RBP4.85□□□□□ -1.63
LINC00534-203ENST00000523406 ZNF705BP0CI00 300 aaPredicted RBP4.85□□□□□ -1.63
LINC00534-203ENST00000523406 FOXA3P55318 350 aaPredicted RBP4.85□□□□□ -1.63
LINC00534-203ENST00000523406 KLF5Q13887 457 aaPredicted RBP4.85□□□□□ -1.63
LINC00534-203ENST00000523406 DEFB136Q30KP8 78 aa4.85□□□□□ -1.63
LINC00534-203ENST00000523406 COA6Q5JTJ3 125 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms