RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ZFP69Q49AA0 526 aa13.06□□□□□ -0.32
FAM49B-208ENST00000518344 CST9LP1Q5W188 147 aa13.06□□□□□ -0.32
FAM49B-208ENST00000518344 M0R2N4 97 aa13.05□□□□□ -0.32
FAM49B-208ENST00000518344 PEX7O00628 323 aa13.05□□□□□ -0.32
FAM49B-208ENST00000518344 PPT1P50897 306 aa13.05□□□□□ -0.32
FAM49B-208ENST00000518344 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
FAM49B-208ENST00000518344 LGALSLQ3ZCW2 172 aaPredicted RBP13.05□□□□□ -0.32
FAM49B-208ENST00000518344 SMUG1Q53HV7 270 aa13.05□□□□□ -0.32
FAM49B-208ENST00000518344 SAPCD1Q5SSQ6 148 aa13.05□□□□□ -0.32
FAM49B-208ENST00000518344 C18orf15Q96N68 181 aa13.05□□□□□ -0.32
FAM49B-208ENST00000518344 SDF2L1Q9HCN8 221 aa13.05□□□□□ -0.32
FAM49B-208ENST00000518344 EPPK1P58107 5090 aaKnown RBP13.05□□□□□ -0.32
FAM49B-208ENST00000518344 DNAH6Q9C0G6 4158 aa13.04□□□□□ -0.32
FAM49B-208ENST00000518344 MBD3L1Q8WWY6 194 aa13.04□□□□□ -0.32
FAM49B-208ENST00000518344 HIST1H2BAQ96A08 127 aa13.04□□□□□ -0.32
FAM49B-208ENST00000518344 KCNS1Q96KK3 526 aa13.04□□□□□ -0.32
FAM49B-208ENST00000518344 SPXQ9BT56 116 aa13.04□□□□□ -0.32
FAM49B-208ENST00000518344 IGLV2-18A0A075B6J9 118 aa13.03□□□□□ -0.32
FAM49B-208ENST00000518344 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
FAM49B-208ENST00000518344 TYMSP04818 313 aa13.03□□□□□ -0.32
FAM49B-208ENST00000518344 CCL18P55774 89 aa13.03□□□□□ -0.32
FAM49B-208ENST00000518344 DPPA3Q6W0C5 159 aa13.03□□□□□ -0.32
FAM49B-208ENST00000518344 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
FAM49B-208ENST00000518344 PAGE4O60829 102 aa13.02□□□□□ -0.33
FAM49B-208ENST00000518344 C1QBP02746 253 aa13.02□□□□□ -0.33
FAM49B-208ENST00000518344 PFN1P07737 140 aaKnown RBP13.02□□□□□ -0.33
FAM49B-208ENST00000518344 H2AFB1P0C5Y9 115 aa13.02□□□□□ -0.33
FAM49B-208ENST00000518344 AKAP14Q86UN6 197 aa13.02□□□□□ -0.33
FAM49B-208ENST00000518344 C11orf21Q9P2W6 132 aa13.02□□□□□ -0.33
FAM49B-208ENST00000518344 DNAH10Q8IVF4 4471 aa13.02□□□□□ -0.33
FAM49B-208ENST00000518344 UBE2G1P62253 170 aa13□□□□□ -0.33
FAM49B-208ENST00000518344 RASL10AQ92737 203 aa13□□□□□ -0.33
FAM49B-208ENST00000518344 VSIG2Q96IQ7 327 aa13□□□□□ -0.33
FAM49B-208ENST00000518344 H3BNG1 76 aa12.99□□□□□ -0.33
FAM49B-208ENST00000518344 M0R2P5 195 aa12.99□□□□□ -0.33
FAM49B-208ENST00000518344 PAX4O43316 350 aa12.99□□□□□ -0.33
FAM49B-208ENST00000518344 FAM3BP58499 235 aaPredicted RBP12.99□□□□□ -0.33
FAM49B-208ENST00000518344 EIF5AL1Q6IS14 154 aaKnown RBP12.99□□□□□ -0.33
FAM49B-208ENST00000518344 Q86TA4 180 aa12.99□□□□□ -0.33
FAM49B-208ENST00000518344 TCEAL7Q9BRU2 100 aa12.99□□□□□ -0.33
FAM49B-208ENST00000518344 LINC00588Q9Y4M8 146 aa12.99□□□□□ -0.33
FAM49B-208ENST00000518344 TRGV4A0A0C4DH28 118 aa12.98□□□□□ -0.33
FAM49B-208ENST00000518344 SFTA3P0C7M3 94 aa12.98□□□□□ -0.33
FAM49B-208ENST00000518344 FHL2Q14192 279 aa12.98□□□□□ -0.33
FAM49B-208ENST00000518344 FMC1Q96HJ9 113 aa12.98□□□□□ -0.33
FAM49B-208ENST00000518344 ZNF479Q96JC4 524 aa12.98□□□□□ -0.33
FAM49B-208ENST00000518344 HHLA3Q9XRX5 114 aa12.98□□□□□ -0.33
FAM49B-208ENST00000518344 FABP5P3A8MUU1 101 aa12.97□□□□□ -0.33
FAM49B-208ENST00000518344 C9JCJ5 164 aa12.97□□□□□ -0.33
FAM49B-208ENST00000518344 AKR1C3P42330 323 aa12.97□□□□□ -0.33
FAM49B-208ENST00000518344 SLAQ13239 276 aa12.97□□□□□ -0.33
FAM49B-208ENST00000518344 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
FAM49B-208ENST00000518344 ZFP30Q9Y2G7 519 aa12.97□□□□□ -0.33
FAM49B-208ENST00000518344 RAB5CP51148 216 aa12.96□□□□□ -0.33
FAM49B-208ENST00000518344 ESRGQ1W209 222 aa12.96□□□□□ -0.33
FAM49B-208ENST00000518344 SLC51BQ86UW2 128 aa12.96□□□□□ -0.33
FAM49B-208ENST00000518344 OR4C5Q8NGB2 326 aa12.96□□□□□ -0.33
FAM49B-208ENST00000518344 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
FAM49B-208ENST00000518344 DNAH2Q9P225 4427 aa12.95□□□□□ -0.34
FAM49B-208ENST00000518344 A0A096LPF7 62 aa12.95□□□□□ -0.34
FAM49B-208ENST00000518344 ORM1P02763 201 aa12.95□□□□□ -0.34
FAM49B-208ENST00000518344 CRYBA4P53673 196 aa12.95□□□□□ -0.34
FAM49B-208ENST00000518344 CCL20P78556 96 aa12.95□□□□□ -0.34
FAM49B-208ENST00000518344 ZNF876PQ49A33 203 aa12.95□□□□□ -0.34
FAM49B-208ENST00000518344 ZNRF2Q8NHG8 242 aa12.95□□□□□ -0.34
FAM49B-208ENST00000518344 TRAV4A0A0B4J268 109 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 IGKV3D-20A0A0C4DH25 116 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 SCO2A0A1W2PP80 73 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 SULT1A2P50226 295 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 CRIP1P50238 77 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 Q6ZR54 194 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 GNG13Q9P2W3 67 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 ICOSQ9Y6W8 199 aa12.94□□□□□ -0.34
FAM49B-208ENST00000518344 TRBV6-1A0A0K0K1D8 114 aa12.93□□□□□ -0.34
FAM49B-208ENST00000518344 TEX46H3BTG2 121 aa12.93□□□□□ -0.34
FAM49B-208ENST00000518344 SH2D1AO60880 128 aa12.93□□□□□ -0.34
FAM49B-208ENST00000518344 LTAP01374 205 aa12.93□□□□□ -0.34
FAM49B-208ENST00000518344 RNASE3P12724 160 aaKnown RBP12.93□□□□□ -0.34
FAM49B-208ENST00000518344 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
FAM49B-208ENST00000518344 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
FAM49B-208ENST00000518344 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
FAM49B-208ENST00000518344 FRAS1Q86XX4 4008 aa12.93□□□□□ -0.34
FAM49B-208ENST00000518344 B4DEV8 164 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 M0R036 132 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 S100A9P06702 114 aaKnown RBP12.92□□□□□ -0.34
FAM49B-208ENST00000518344 C9orf62Q8N4C0 152 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 NHLRC2Q8NBF2 726 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 Q9H8V8 135 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 MANBALQ9NQG1 85 aa12.92□□□□□ -0.34
FAM49B-208ENST00000518344 TRAV1-1A0A0B4J248 108 aa12.91□□□□□ -0.34
FAM49B-208ENST00000518344 A0A1B0GVG6 124 aa12.91□□□□□ -0.34
FAM49B-208ENST00000518344 ASIPP42127 132 aa12.91□□□□□ -0.34
FAM49B-208ENST00000518344 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
FAM49B-208ENST00000518344 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
FAM49B-208ENST00000518344 PCNPQ8WW12 178 aaKnown RBP12.91□□□□□ -0.34
FAM49B-208ENST00000518344 NBDYA0A0U1RRE5 68 aa12.9□□□□□ -0.34
FAM49B-208ENST00000518344 PGPEP1LA6NFU8 196 aa12.9□□□□□ -0.34
FAM49B-208ENST00000518344 KRBOX1C9JBD0 128 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms