RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 PLEKHH2Q8IVE3 1493 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 IGKV2-28A0A075B6P5 120 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 RBAKDNA6NC62 111 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 C2orf70A6NJV1 201 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 RTL8CO15255 209 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 IGKV2D-28P01615 120 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 MT-ATP8P03928 68 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 IGKV3-11P04433 115 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 LINC00032P0C843 101 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 KRTAP10-11P60412 298 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 RBM3P98179 157 aaKnown RBP2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 PYY3Q5JQD4 70 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 RPL7L1Q6DKI1 246 aaKnown RBP2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 Q6ZTI0 123 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 C9orf163Q8N9P6 203 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 ANAPC11Q9NYG5 84 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 CCL26Q9Y258 94 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 TCHHQ07283 1943 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 GAPVD1Q14C86 1478 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 RGPD4Q7Z3J3 1758 aa2.26□□□□□ -2.05
RNU4-60P-201ENST00000517239 CPSF1Q10570 1443 aaKnown RBP2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 MON2Q7Z3U7 1717 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 NWD2Q9ULI1 1742 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 MYO9BQ13459 2157 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 MUC4Q99102 2169 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 UBE2L5PA0A1B0GUS4 154 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 P0C880 135 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 POLR2JP52435 117 aaKnown RBP2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 ATP5EP56381 51 aaPredicted RBP2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 UBE2L3P68036 154 aaKnown RBP2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 ZNF833PQ6ZTB9 187 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 TIMM21Q9BVV7 248 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 LINC00312Q9Y6C7 94 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 SBF2Q86WG5 1849 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 LAMB1P07942 1786 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 DAPK1P53355 1430 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 TET3O43151 1660 aa2.25□□□□□ -2.05
RNU4-60P-201ENST00000517239 SHROOM2Q13796 1616 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 MICAL3Q7RTP6 2002 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 LAMB4A4D0S4 1761 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 ABCC3O15438 1527 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 PIGBOS1A0A0B4J2F0 54 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 KRTAP1-4P0C5Y4 121 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 IL7P13232 177 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 DCDP81605 110 aaKnown RBP2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 ELOBQ15370 118 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 UNQ5815/PRO19632Q6UWF5 114 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 C5orf38Q86SI9 138 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 SBSPONQ8IVN8 264 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 LYPD1Q8N2G4 141 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 TMEM141Q96I45 108 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 ATG5Q9H1Y0 275 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 PTPRMP28827 1452 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 PTPRFP10586 1907 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 COL4A5P29400 1685 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 ADAMTS7Q9UKP4 1686 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 RTEL1-TNFRSF6BF6WH68 1400 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 C10orf71Q711Q0 1435 aa2.24□□□□□ -2.05
RNU4-60P-201ENST00000517239 LAMC3Q9Y6N6 1575 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 TNS1Q9HBL0 1735 aaKnown RBP2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 TRAV2A0A0B4J234 112 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 A6NIN4 97 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 H3BQF6 201 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 IGLC1P0CG04 106 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 COX7CP15954 63 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 UBE2G1P62253 170 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 SLC48A1Q6P1K1 146 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 SH2D6Q7Z4S9 175 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 ZNF431Q8TF32 576 aaPredicted RBP2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 DPH3P1Q9H4G8 78 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 PATJQ8NI35 1801 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 CUL9Q8IWT3 2517 aa2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 RGPD3A6NKT7 1758 aaPredicted RBP2.23□□□□□ -2.05
RNU4-60P-201ENST00000517239 PXDNLA1KZ92 1463 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 A0A0G2JQZ4 141 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 LRCOL1A6NCL2 159 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 GNGT2O14610 69 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 SSSCA1O60232 199 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 TFF1P04155 84 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 PDE6HQ13956 83 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 IQCJQ1A5X6 159 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 KIAA2026Q5HYC2 2103 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 SMAD5-AS1Q9Y6J3 95 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 ABCC5O15440 1437 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 CASKIN1Q8WXD9 1431 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 CEP192Q8TEP8 1941 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 ZFHX2Q9C0A1 2572 aaPredicted RBP2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 LRRIQ1Q96JM4 1722 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 MARF1Q9Y4F3 1742 aaKnown RBP2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 TANC1Q9C0D5 1861 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 MAP3K1Q13233 1512 aa2.22□□□□□ -2.05
RNU4-60P-201ENST00000517239 PPLO60437 1756 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 GPR179Q6PRD1 2367 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 IGKV1D-17A0A075B6S4 117 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 IGLV6-57P01721 117 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 SLC25A6P12236 298 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 CBLN1P23435 193 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 LINC00315P59091 139 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 RHOHQ15669 191 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 SPRNQ5BIV9 151 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms