RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 LOC107986453A0A1B0GWG9 222 aa-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 ZNF670-ZNF695F2Z2N8 137 aa-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 GTF2A1P52655 376 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 EMX2Q04743 252 aa-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 SPAG11BQ08648 103 aa-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 SMIM7Q9BQ49 75 aa-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 ARMC1Q9NVT9 282 aa-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 ADCY9O60503 1353 aa-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PCF11O94913 1555 aaKnown RBP-1.39□□□□□ -2.63
RNU6-1088P-201ENST00000516850 DLC1Q96QB1 1528 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 LRP1BQ9NZR2 4599 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 TRBV10-1A0A0K0K1A3 114 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 MAXP61244 160 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 ITGB3BPQ13352 177 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 AKIRIN2Q53H80 203 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 OR5A2Q8NGI9 324 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PHB2Q99623 299 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 TAF9BQ9HBM6 251 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 LYRM2Q9NU23 88 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 SSC5DA1L4H1 1573 aa-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 NUP210Q8TEM1 1887 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1088P-201ENST00000516850 PLB1Q6P1J6 1458 aa-1.41□□□□□ -2.63
RNU6-1088P-201ENST00000516850 FABP2P12104 132 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 SPRR2BP35325 72 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 NUP35Q8NFH5 326 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 AP3S1Q92572 193 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 PRELID3AQ96N28 172 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 PRAP1Q96NZ9 151 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 TMEM242Q9NWH2 141 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 PRO0255Q9UI72 69 aa-1.41□□□□□ -2.64
RNU6-1088P-201ENST00000516850 LAMB1P07942 1786 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 ATG12O94817 140 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 IFNA6P05013 189 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 ELOF1P60002 83 aaKnown RBP-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 Q5VSD8 79 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 BORCS8Q96FH0 119 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 SH3BGRL3Q9H299 93 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 IL20Q9NYY1 176 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 WNK1Q9H4A3 2382 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 TRAPPC8Q9Y2L5 1435 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 ACANP16112 2415 aa-1.42□□□□□ -2.64
RNU6-1088P-201ENST00000516850 RBAKDNA6NC62 111 aa-1.43□□□□□ -2.64
RNU6-1088P-201ENST00000516850 COX4I1P13073 169 aa-1.43□□□□□ -2.64
RNU6-1088P-201ENST00000516850 CDKN2CP42773 168 aa-1.43□□□□□ -2.64
RNU6-1088P-201ENST00000516850 FKBP11Q9NYL4 201 aa-1.43□□□□□ -2.64
RNU6-1088P-201ENST00000516850 CHD6Q8TD26 2715 aa-1.43□□□□□ -2.64
RNU6-1088P-201ENST00000516850 CAMSAP1Q5T5Y3 1602 aa-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 A0A0D9SFI3 127 aa-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 POLR2JP52435 117 aaKnown RBP-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 RGS21Q2M5E4 152 aa-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 UBE2DNLQ8IWF7 75 aa-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 LAMTOR3Q9UHA4 124 aa-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 PIEZO2Q9H5I5 2752 aa-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 TCOF1Q13428 1488 aaKnown RBP-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 LRP5O75197 1615 aa-1.44□□□□□ -2.64
RNU6-1088P-201ENST00000516850 PLXNA1Q9UIW2 1896 aa-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 ZNF815PA8K554 130 aa-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 OR2H2O95918 312 aa-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 IFNA21P01568 189 aa-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 CNFNQ9BYD5 112 aa-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 OTORQ9NRC9 128 aa-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 MAP1AP78559 2803 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 C2CD3Q4AC94 2353 aa-1.45□□□□□ -2.64
RNU6-1088P-201ENST00000516850 AKAP11Q9UKA4 1901 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 TAS2R41P59536 307 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 FADDQ13158 208 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 KRTAP19-8Q3LI54 63 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 SSBP3-AS1Q7Z2R9 100 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 Q8IZM0 81 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 FLNBO75369 2602 aaKnown RBP-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 MYH3P11055 1940 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 CSPG4Q6UVK1 2322 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 HERC1Q15751 4861 aa-1.46□□□□□ -2.64
RNU6-1088P-201ENST00000516850 A0A087WTM6 91 aa-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 NIPSNAP2O75323 286 aa-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 CSN2P05814 226 aa-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 S100A6P06703 90 aa-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 GCHFRP30047 84 aa-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 VPS25Q9BRG1 176 aa-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 LRTM1Q9HBL6 345 aa-1.47□□□□□ -2.64
RNU6-1088P-201ENST00000516850 KIDINS220Q9ULH0 1771 aa-1.47□□□□□ -2.65
RNU6-1088P-201ENST00000516850 PLXNA2O75051 1894 aa-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 ZNF142P52746 1687 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 ADCYAP1P18509 176 aa-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 SDC2P34741 201 aa-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 LSM3P62310 102 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 ARF6P62330 175 aa-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 Q6ZRX8 168 aa-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 Q96NJ1 140 aa-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 NBEAL1Q6ZS30 2694 aa-1.48□□□□□ -2.65
RNU6-1088P-201ENST00000516850 TMEM210A6NLX4 147 aa-1.49□□□□□ -2.65
RNU6-1088P-201ENST00000516850 SLC25A4P12235 298 aa-1.49□□□□□ -2.65
RNU6-1088P-201ENST00000516850 SPRR1AP35321 89 aa-1.49□□□□□ -2.65
RNU6-1088P-201ENST00000516850 OR13C6PQ8NH95 151 aa-1.49□□□□□ -2.65
RNU6-1088P-201ENST00000516850 SS18L2Q9UHA2 77 aa-1.49□□□□□ -2.65
RNU6-1088P-201ENST00000516850 KMT2CQ8NEZ4 4911 aaKnown RBP-1.49□□□□□ -2.65
RNU6-1088P-201ENST00000516850 PTPRGP23470 1445 aa-1.49□□□□□ -2.65
RNU6-1088P-201ENST00000516850 SPTBN1Q01082 2364 aaKnown RBP-1.5□□□□□ -2.65
RNU6-1088P-201ENST00000516850 TCRBV3S1A0A5B6 114 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 379.3 ms