RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 TRBV30A0A0K0K1B3 111 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 TPST1O60507 370 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 YPEL1O60688 119 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 RBP4P02753 201 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 EVI2AP22794 236 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 HIST1H1AQ02539 215 aaPredicted RBP0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 LYPD5Q6UWN5 251 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 MMGT1Q8N4V1 131 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 TET1Q8NFU7 2136 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 LAMA4Q16363 1823 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 ANK1P16157 1881 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 ROS1P08922 2347 aa0.63□□□□□ -2.31
RNU2-53P-201ENST00000516257 MYH1P12882 1939 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 UHRF1BP1LA0JNW5 1464 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 TRAV2A0A0B4J234 112 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 IGKCP01834 107 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 MPC1LP0DKB6 136 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 IL7P13232 177 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 NCS1P62166 190 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 SMIM21Q3B7S5 101 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 XAF1Q6GPH4 301 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 UNQ5815/PRO19632Q6UWF5 114 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 SLC25A26Q70HW3 274 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 DEFB132Q7Z7B7 95 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 PPDPFLQ8WWR9 84 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 DMAC1Q96GE9 116 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 CCL19Q99731 98 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 SMIM3Q9BZL3 60 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 TAS2R8Q9NYW2 309 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 COPZ2Q9P299 210 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 KIDINS220Q9ULH0 1771 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 DISP2A7MBM2 1401 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 MUC4Q99102 2169 aa0.62□□□□□ -2.31
RNU2-53P-201ENST00000516257 HIGD1CA8MV81 97 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 J3QR89 54 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 K7EIL1 84 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 M0R2P5 195 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 TSPAN19P0C672 248 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 IGLC6P0CF74 106 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 POLR2JP52435 117 aaKnown RBP0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 CAV3P56539 151 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 CLLU1Q5K131 121 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 GLYATL3Q5SZD4 288 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 C10orf99Q6UWK7 81 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 Q6ZS92 163 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 Q86TA4 180 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 SNX29P2Q8IUI4 249 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 ATOH7Q8N100 152 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 ATP6V0E2Q8NHE4 81 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 ATG5Q9H1Y0 275 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 NOP16Q9Y3C1 178 aaKnown RBP0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 EML5Q05BV3 1969 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 CCDC171Q6TFL3 1326 aa0.61□□□□□ -2.31
RNU2-53P-201ENST00000516257 FANCMQ8IYD8 2048 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 TRBV20-1A0A075B6N2 111 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 TRBV10-1A0A0K0K1A3 114 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 M0R2Z0 102 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 SNRNP200O75643 2136 aaKnown RBP0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 NCR2O95944 276 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 S100A12P80511 92 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 FXYD3Q14802 87 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 ATP11AUNQ6ZP68 121 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 VPS25Q9BRG1 176 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 LSM2Q9Y333 95 aaKnown RBP0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 PRG4Q92954 1404 aaPredicted RBP0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 SYNJ1O43426 1573 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 CITO14578 2027 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 CNTRLQ7Z7A1 2325 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 HELZ2Q9BYK8 2649 aaKnown RBP0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 LRP5O75197 1615 aa0.6□□□□□ -2.31
RNU2-53P-201ENST00000516257 TRAV17A0A0B4J275 112 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 NBDYA0A0U1RRE5 68 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 CXorf51AA0A1B0GTR3 108 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 LOC101927531A0A1B0GV80 90 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 J3QLW9 94 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 LINC00694P0DN24 101 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 COX4I1P13073 169 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 ARPC4P59998 168 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 PRB3Q04118 309 aaPredicted RBP0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 IQCJQ1A5X6 159 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 CTAGE3PQ8IX95 158 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 DYNLRB2Q8TF09 96 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 SAR1AQ9NR31 198 aa0.59□□□□□ -2.31
RNU2-53P-201ENST00000516257 ZGRF1Q86YA3 2104 aa0.59□□□□□ -2.32
RNU2-53P-201ENST00000516257 CDK12Q9NYV4 1490 aaPredicted RBP0.59□□□□□ -2.32
RNU2-53P-201ENST00000516257 HELZP42694 1942 aaKnown RBP0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 FAM236AA0A1B0GUQ0 79 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 FAM236BA0A1B0GV22 79 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 CCKP06307 115 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 SPINK9Q5DT21 86 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 C5orf56Q8N8D9 126 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 TSTD1Q8NFU3 115 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 PLAC4Q8WY50 150 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 LINC00208Q96KT6 92 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 PFDN5Q99471 154 aa0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 PAIP2BQ9ULR5 123 aaKnown RBP0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 ZCCHC6Q5VYS8 1495 aaKnown RBP0.58□□□□□ -2.32
RNU2-53P-201ENST00000516257 TRPM7Q96QT4 1865 aa0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 ERCC6Q03468 1493 aa0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 CCDC179H3BU77 68 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms