RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ZFAND2AQ8N6M9 145 aa4.35□□□□□ -1.71
TRAPPC11-209ENST00000512476 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
TRAPPC11-209ENST00000512476 AMELYQ99218 206 aa4.35□□□□□ -1.71
TRAPPC11-209ENST00000512476 PI4KAP42356 2102 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 USP34Q70CQ2 3546 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 IGHV3-43A0A0B4J1X8 118 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 BMPR1BO00238 502 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 NDUFB2O95178 105 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 IGKV1D-33P01593 117 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 IGKV1-33P01594 117 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 TSKUQ8WUA8 353 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 S100A13Q99584 98 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 GABARAPL1Q9H0R8 117 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 C11orf1Q9H5F2 150 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 KIAA1549Q9HCM3 1950 aa4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 COL5A1P20908 1838 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-209ENST00000512476 IGKV3D-11A0A0A0MRZ8 115 aa4.34□□□□□ -1.72
TRAPPC11-209ENST00000512476 HLA-DQA1P01909 254 aa4.34□□□□□ -1.72
TRAPPC11-209ENST00000512476 FUSP35637 526 aaKnown RBP eCLIP4.34□□□□□ -1.72
TRAPPC11-209ENST00000512476 SDK1Q7Z5N4 2213 aa4.34□□□□□ -1.72
TRAPPC11-209ENST00000512476 RP1P56715 2156 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 B4DSR2 109 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 CGAP01215 116 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 CLPSP04118 112 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 INSL4Q14641 139 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 HMGN2P46Q86SG4 172 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 TMEM190Q8WZ59 177 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 WFDC6Q9BQY6 131 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 GOLGA4Q13439 2230 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 MED13Q9UHV7 2174 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 IGLV3-12A0A075B6K2 115 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 TRGV5A0A0B4J1U4 118 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 PROP1O75360 226 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 RBP4P02753 201 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 HMGA2P52926 109 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 YPEL3P61236 119 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 PCBD1P61457 104 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 CLEC2BQ92478 149 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 DPH3P1Q9H4G8 78 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 ASXL3Q9C0F0 2248 aa4.33□□□□□ -1.72
TRAPPC11-209ENST00000512476 ZDBF2Q9HCK1 2354 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 COL27A1Q8IZC6 1860 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 VCANP13611 3396 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 IGHV3OR15-7A0A075B7D8 119 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 SFT2D2O95562 160 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 CYB5AP00167 134 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 BLCAPP62952 87 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 SDK2Q58EX2 2172 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 C11orf94C9JXX5 98 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 IGKV3-11P04433 115 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 GYPBP06028 91 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 C16orf47Q6ZP98 133 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 UNC13CQ8NB66 2214 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 MUC4Q99102 2169 aa4.32□□□□□ -1.72
TRAPPC11-209ENST00000512476 SPTBP11277 2137 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 KIAA2026Q5HYC2 2103 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 TIMM17BO60830 172 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 CCL4P13236 92 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 SMIM11AP58511 58 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 NPC2P61916 151 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 SUPT4H1P63272 117 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 TMEM155Q4W5P6 130 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 C10orf91Q5T1B1 145 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 ZNF660Q6AZW8 331 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 S100ZQ8WXG8 99 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 C17orf51A8MQB3 221 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 G3V3Q6 166 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 SNCGO76070 127 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 CFDP00746 253 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 APCSP02743 223 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 HSPB1P04792 205 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 PRB4P10163 310 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 NNATQ16517 81 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 FAM229BQ4G0N7 80 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 S100A7L2Q5SY68 101 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 MIR17HGQ75NE6 70 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 C1orf147Q96MC9 270 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 MUC3AQ02505 3323 aa4.31□□□□□ -1.72
TRAPPC11-209ENST00000512476 CPSF4LA6NMK7 179 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 C3orf84H3BNL1 204 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 IGHV3-7P01780 117 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 NPPCP23582 126 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 NABP2Q9BQ15 211 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 LAMA1P25391 3075 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 IGHV3-49A0A0A0MS15 119 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 A6NN06 94 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 CYSRT1A8MQ03 144 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 LINC00299Q6ZSB3 139 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 FAM213BQ8TBF2 198 aa4.3□□□□□ -1.72
TRAPPC11-209ENST00000512476 IGHV7-4-1A0A0J9YVY3 117 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 hADV29S1A0JD25 119 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 COX6A1P12074 109 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 COX7CP15954 63 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 APCDD1LQ8NCL9 501 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 CBLN1P23435 193 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 LINC01545Q5VT33 79 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms