RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 B9D2Q9BPU9 175 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 H0YIZ8 118 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 NDUFS7O75251 213 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 LINC00479Q96M42 142 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 SIGLEC8Q9NYZ4 499 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 NDUFA1O15239 70 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 DEFB135Q30KP9 77 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 BVES-AS1Q5T3Y7 98 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 SEM1Q6ZVN7 128 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 WFDC9Q8NEX5 89 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 YLPM1P49750 1951 aaKnown RBP4.57□□□□□ -1.68
USP38-203ENST00000511739 IGLV3-9A0A075B6K5 115 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 TRBV20-1A0A075B6N2 111 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 IGHV4-30-2A0A087WSY4 118 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 A0A1B0GX51 115 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 RBM3P98179 157 aaKnown RBP4.57□□□□□ -1.68
USP38-203ENST00000511739 FAM104BQ5XKR9 115 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 ORMDL1Q9P0S3 153 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BKO60814 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 PRB2P02812 416 aaPredicted RBP4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BJP06899 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BOP23527 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BBP33778 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 MYCNOSP40205 109 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BDP58876 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BCP62807 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST2H2BEQ16778 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BHQ93079 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BNQ99877 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BMQ99879 126 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.57□□□□□ -1.68
USP38-203ENST00000511739 IGKV2-29A2NJV5 120 aaPredicted RBP4.57□□□□□ -1.68
USP38-203ENST00000511739 SHISA9B4DS77 424 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 ZNF833PQ6ZTB9 187 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 C5orf24Q7Z6I8 188 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 C17orf77Q96MU5 243 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 PRR25Q96S07 402 aa4.57□□□□□ -1.68
USP38-203ENST00000511739 MUC22E2RYF6 1773 aaPredicted RBP4.56□□□□□ -1.68
USP38-203ENST00000511739 HIST2H2BCQ6DN03 193 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 NDUFA4L2Q9NRX3 87 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 IGHV4-61A0A0C4DH41 118 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 H0Y9J4 135 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 C3orf79P0CE67 100 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 CASC2Q6XLA1 102 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 NPBQ8NG41 125 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 ZNF492Q9P255 531 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 TRBV24-1A0A075B6N3 115 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 KIR2DL5BQ8NHK3 375 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 PHF3Q92576 2039 aaKnown RBP4.56□□□□□ -1.68
USP38-203ENST00000511739 TRAV1-1A0A0B4J248 108 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 LYL1P12980 280 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 VSIG2Q96IQ7 327 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 DEFB4AO15263 64 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 HOXB4P17483 251 aaPredicted RBP4.56□□□□□ -1.68
USP38-203ENST00000511739 HERV-K104P63124 156 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 ADAMTSL5Q6ZMM2 481 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 C11orf45Q8TAV5 145 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 CARD19Q96LW7 228 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 Q9H8V8 135 aa4.56□□□□□ -1.68
USP38-203ENST00000511739 H3BRN7 92 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 K7EQD1 137 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 LTAP01374 205 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 RNF152Q8N8N0 203 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 GTSF1LQ9H1H1 148 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 IGKV2-24A0A0C4DH68 120 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 LINC00311Q8N616 119 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 ZC2HC1AQ96GY0 325 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 NREPQ16612 68 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 PRSS57Q6UWY2 283 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 MED12Q93074 2177 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 COL4A3Q01955 1670 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 FAM231BA6NCW3 169 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 J3QQQ9 107 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 IGLV3-1P01715 115 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 IGHV4-38-2P0DP08 117 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 SRSF3P84103 164 aaKnown RBP4.55□□□□□ -1.68
USP38-203ENST00000511739 MRPL51Q4U2R6 128 aaKnown RBP4.55□□□□□ -1.68
USP38-203ENST00000511739 DUX4L9Q6RFH8 374 aaPredicted RBP4.55□□□□□ -1.68
USP38-203ENST00000511739 PROK2Q9HC23 129 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 HHLA3Q9XRX5 114 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 PROP1O75360 226 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 PLA2G2CQ5R387 149 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 NRGNQ92686 78 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 KIAA2026Q5HYC2 2103 aa4.55□□□□□ -1.68
USP38-203ENST00000511739 TNCP24821 2201 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 UBE2CO00762 179 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 INSL3P51460 131 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 COX7B2Q8TF08 81 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 PRO1854Q9UHT4 67 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 PTPRQQ9UMZ3 2332 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 GNRH2O43555 120 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
USP38-203ENST00000511739 TMEM131Q92545 1883 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 RS1O15537 224 aa4.54□□□□□ -1.68
USP38-203ENST00000511739 DAZ2Q13117 558 aaKnown RBP4.54□□□□□ -1.68
USP38-203ENST00000511739 DAZ4Q86SG3 579 aaKnown RBP4.54□□□□□ -1.68
USP38-203ENST00000511739 OPRPNQ99935 248 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms