RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 IGHV3-53P01767 116 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 TYMSP04818 313 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 FHITP49789 147 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 UBE2G2P60604 165 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 RASL10AQ92737 203 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 NDFIP1Q9BT67 221 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 MAP1LC3BQ9GZQ8 125 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 C11orf21Q9P2W6 132 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 FBLL1A6NHQ2 334 aaKnown RBP8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 FHL2Q14192 279 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 ESRGQ1W209 222 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 PRNTQ86SH4 94 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 LINC00479Q96M42 142 aa8.05□□□□□ -1.12
SH3RF1-205ENST00000511421 A0A096LPF7 62 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 TRAV34A0A0B4J273 112 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 BCL2L11O43521 198 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 ATP6V1G1O75348 118 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 GCGP01275 180 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 SEC11BP0C7V7 166 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 KCNS1Q96KK3 526 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 SDF2L1Q9HCN8 221 aa8.04□□□□□ -1.12
SH3RF1-205ENST00000511421 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 PEX7O00628 323 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 IFNA7P01567 189 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 PFN1P07737 140 aaKnown RBP8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 CRYBA4P53673 196 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 SMUG1Q53HV7 270 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 ZNF479Q96JC4 524 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 ZNF471Q9BX82 626 aaPredicted RBP8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 NKX6-2Q9C056 277 aaPredicted RBP8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
SH3RF1-205ENST00000511421 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 M0R2P5 195 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 PAX4O43316 350 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 SFTA3P0C7M3 94 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 SLAQ13239 276 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 SAPCD1Q5SSQ6 148 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 TMUB2Q71RG4 321 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 MBD3L1Q8WWY6 194 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 HIST1H2BAQ96A08 127 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 UPK3BQ9BT76 320 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 HHLA3Q9XRX5 114 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 ARL2-SNX15V9GYD0 113 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 PRSS29PA6NIE9 313 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 UMAD1C9J7I0 102 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 ZFP69Q49AA0 526 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 C1orf134Q5TEV5 83 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 STOML3Q8TAV4 291 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 Q9H8V8 135 aa8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 MRPS16Q9Y3D3 137 aaKnown RBP8.02□□□□□ -1.13
SH3RF1-205ENST00000511421 TRAV4A0A0B4J268 109 aa8.01□□□□□ -1.13
SH3RF1-205ENST00000511421 PPT1P50897 306 aa8.01□□□□□ -1.13
SH3RF1-205ENST00000511421 Q6ZNX1 250 aa8.01□□□□□ -1.13
SH3RF1-205ENST00000511421 Q86TA4 180 aa8.01□□□□□ -1.13
SH3RF1-205ENST00000511421 FAM213BQ8TBF2 198 aa8.01□□□□□ -1.13
SH3RF1-205ENST00000511421 ICOSQ9Y6W8 199 aa8.01□□□□□ -1.13
SH3RF1-205ENST00000511421 TRGV4A0A0C4DH28 118 aa8□□□□□ -1.13
SH3RF1-205ENST00000511421 EIF5AP63241 154 aaKnown RBP8□□□□□ -1.13
SH3RF1-205ENST00000511421 TCTE3Q8IZS6 198 aa8□□□□□ -1.13
SH3RF1-205ENST00000511421 SFT2D1Q8WV19 159 aa8□□□□□ -1.13
SH3RF1-205ENST00000511421 C9orf85Q96MD7 179 aa8□□□□□ -1.13
SH3RF1-205ENST00000511421 DNAH11Q96DT5 4516 aa8□□□□□ -1.13
SH3RF1-205ENST00000511421 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 IGKV3D-20A0A0C4DH25 116 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 PAGE4O60829 102 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 RNASE3P12724 160 aaKnown RBP7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 SOHLH1Q5JUK2 328 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 CST9LP1Q5W188 147 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 DPPA3Q6W0C5 159 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 COX8CQ7Z4L0 72 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 OR4C5Q8NGB2 326 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 TCEAL7Q9BRU2 100 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 KRTAP1-5Q9BYS1 174 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 PKHD1P08F94 4074 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 PKD1P98161 4303 aa7.99□□□□□ -1.13
SH3RF1-205ENST00000511421 TRBV6-1A0A0K0K1D8 114 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 FABP5P3A8MUU1 101 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 PFDN1O60925 122 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 TPT1P13693 172 aaKnown RBP7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 CRIP1P50238 77 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 MRPL23Q16540 153 aaKnown RBP7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 LGALSLQ3ZCW2 172 aaPredicted RBP7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 A0A1B0GV50 99 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 C9JCJ5 164 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 K7EQD1 137 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 ZNF876PQ49A33 203 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 C6orf223Q8N319 242 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 PTH2Q96A98 100 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
SH3RF1-205ENST00000511421 PGPEP1LA6NFU8 196 aa7.97□□□□□ -1.13
SH3RF1-205ENST00000511421 RS1O15537 224 aa7.97□□□□□ -1.13
SH3RF1-205ENST00000511421 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
SH3RF1-205ENST00000511421 GYPEP15421 78 aa7.97□□□□□ -1.13
SH3RF1-205ENST00000511421 LYPD5Q6UWN5 251 aa7.97□□□□□ -1.13
SH3RF1-205ENST00000511421 NEGR1Q7Z3B1 354 aa7.97□□□□□ -1.13
SH3RF1-205ENST00000511421 A0A1W2PPQ1 181 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms