RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 C11orf52Q96A22 123 aa12.16□□□□□ -0.46
CLDND1-221ENST00000510541 SDF2L1Q9HCN8 221 aa12.16□□□□□ -0.46
CLDND1-221ENST00000510541 FABP5P3A8MUU1 101 aa12.15□□□□□ -0.46
CLDND1-221ENST00000510541 CIDEAO60543 219 aa12.15□□□□□ -0.46
CLDND1-221ENST00000510541 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-221ENST00000510541 Q6ZQT7 251 aa12.15□□□□□ -0.46
CLDND1-221ENST00000510541 PRNTQ86SH4 94 aa12.15□□□□□ -0.46
CLDND1-221ENST00000510541 MUC4Q99102 2169 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 IGHV3-16A0A0C4DH30 117 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 GCGP01275 180 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 SLAQ13239 276 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 RNF212Q495C1 297 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 TMEM183AQ8IXX5 376 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
CLDND1-221ENST00000510541 ZNF80P51504 273 aaPredicted RBP12.13□□□□□ -0.47
CLDND1-221ENST00000510541 UBE2G1P62253 170 aa12.13□□□□□ -0.47
CLDND1-221ENST00000510541 BLOC1S1P78537 153 aa12.13□□□□□ -0.47
CLDND1-221ENST00000510541 Q6ZTI0 123 aa12.13□□□□□ -0.47
CLDND1-221ENST00000510541 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
CLDND1-221ENST00000510541 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
CLDND1-221ENST00000510541 SACSQ9NZJ4 4579 aa12.12□□□□□ -0.47
CLDND1-221ENST00000510541 M0R2P5 195 aa12.12□□□□□ -0.47
CLDND1-221ENST00000510541 PDE6DO43924 150 aa12.12□□□□□ -0.47
CLDND1-221ENST00000510541 AKR1C3P42330 323 aa12.12□□□□□ -0.47
CLDND1-221ENST00000510541 ZNF674Q2M3X9 581 aa12.12□□□□□ -0.47
CLDND1-221ENST00000510541 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
CLDND1-221ENST00000510541 ALMS1Q8TCU4 4167 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 TRAV34A0A0B4J273 112 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 GAGE12BA1L429 117 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 GAGE7O76087 117 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 LY6G6CO95867 125 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 IFNA1P01562 189 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 TYMSP04818 313 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 GAGE12FP0CL80 117 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 GAGE12GP0CL81 117 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 GAGE12IP0CL82 117 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 MUC21Q5SSG8 566 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 TMEM88Q6PEY1 159 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 SGK494Q96LW2 274 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 C9orf85Q96MD7 179 aa12.11□□□□□ -0.47
CLDND1-221ENST00000510541 TRGV2A0A075B6R0 118 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 F5H768 121 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 CXCL1P09341 107 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 CCL20P78556 96 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 MEF2BQ02080 365 aaPredicted RBP12.1□□□□□ -0.47
CLDND1-221ENST00000510541 FAM162BQ5T6X4 162 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 POM121L12Q8N7R1 296 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 C11orf21Q9P2W6 132 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 DNAH1Q9P2D7 4330 aa12.1□□□□□ -0.47
CLDND1-221ENST00000510541 GNG13Q9P2W3 67 aa12.09□□□□□ -0.47
CLDND1-221ENST00000510541 VAX2Q9UIW0 290 aa12.09□□□□□ -0.47
CLDND1-221ENST00000510541 RYR3Q15413 4870 aa12.09□□□□□ -0.47
CLDND1-221ENST00000510541 GNRH2O43555 120 aa12.08□□□□□ -0.48
CLDND1-221ENST00000510541 BCL2P10415 239 aa12.08□□□□□ -0.48
CLDND1-221ENST00000510541 CRIP1P50238 77 aa12.08□□□□□ -0.48
CLDND1-221ENST00000510541 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
CLDND1-221ENST00000510541 ZC2HC1AQ96GY0 325 aa12.08□□□□□ -0.48
CLDND1-221ENST00000510541 IL36BQ9NZH7 164 aa12.08□□□□□ -0.48
CLDND1-221ENST00000510541 TRAV4A0A0B4J268 109 aa12.07□□□□□ -0.48
CLDND1-221ENST00000510541 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
CLDND1-221ENST00000510541 SCO2A0A1W2PP80 73 aa12.07□□□□□ -0.48
CLDND1-221ENST00000510541 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
CLDND1-221ENST00000510541 HTN3P15516 51 aa12.07□□□□□ -0.48
CLDND1-221ENST00000510541 HOXA5P20719 270 aa12.07□□□□□ -0.48
CLDND1-221ENST00000510541 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
CLDND1-221ENST00000510541 BAGE2Q86Y30 109 aa12.06□□□□□ -0.48
CLDND1-221ENST00000510541 NAGKQ9UJ70 344 aa12.06□□□□□ -0.48
CLDND1-221ENST00000510541 RYR2Q92736 4967 aa12.06□□□□□ -0.48
CLDND1-221ENST00000510541 KRBOX1C9JBD0 128 aa12.05□□□□□ -0.48
CLDND1-221ENST00000510541 MED14OSP0DP75 135 aa12.05□□□□□ -0.48
CLDND1-221ENST00000510541 RPL35P42766 123 aaKnown RBP12.05□□□□□ -0.48
CLDND1-221ENST00000510541 ALKAL2Q6UX46 152 aa12.05□□□□□ -0.48
CLDND1-221ENST00000510541 ZNF575Q86XF7 245 aa12.05□□□□□ -0.48
CLDND1-221ENST00000510541 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 A0A1B0GV50 99 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 TMEM250H0YL14 139 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 SH2D1AO60880 128 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 FHL2Q14192 279 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 SCRT2Q9NQ03 307 aa12.04□□□□□ -0.48
CLDND1-221ENST00000510541 MRPL16Q9NX20 251 aaKnown RBP12.04□□□□□ -0.48
CLDND1-221ENST00000510541 B4DEV8 164 aa12.03□□□□□ -0.48
CLDND1-221ENST00000510541 ASIPP42127 132 aa12.03□□□□□ -0.48
CLDND1-221ENST00000510541 OR5I1Q13606 314 aa12.03□□□□□ -0.48
CLDND1-221ENST00000510541 BIN3Q9NQY0 253 aa12.03□□□□□ -0.48
CLDND1-221ENST00000510541 ORM1P02763 201 aa12.02□□□□□ -0.49
CLDND1-221ENST00000510541 NKX2-5P52952 324 aaPredicted RBP12.02□□□□□ -0.49
CLDND1-221ENST00000510541 CRYBA4P53673 196 aa12.02□□□□□ -0.49
CLDND1-221ENST00000510541 CCL18P55774 89 aa12.02□□□□□ -0.49
CLDND1-221ENST00000510541 ZNF876PQ49A33 203 aa12.02□□□□□ -0.49
CLDND1-221ENST00000510541 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.49
CLDND1-221ENST00000510541 UPK3BQ9BT76 320 aa12.02□□□□□ -0.49
CLDND1-221ENST00000510541 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
CLDND1-221ENST00000510541 RS1O15537 224 aa12.01□□□□□ -0.49
CLDND1-221ENST00000510541 ZNF506Q5JVG8 444 aa12.01□□□□□ -0.49
CLDND1-221ENST00000510541 VPS13DQ5THJ4 4388 aa12□□□□□ -0.49
CLDND1-221ENST00000510541 A8MWV9 139 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms