RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 PTPRFP10586 1907 aa1.61□□□□□ -2.15
OTUD4-208ENST00000509620 LAMB2P55268 1798 aa1.61□□□□□ -2.15
OTUD4-208ENST00000509620 PLXNA4Q9HCM2 1894 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 TMEM2Q9UHN6 1383 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 HELZP42694 1942 aaKnown RBP1.6□□□□□ -2.15
OTUD4-208ENST00000509620 NAIPQ13075 1403 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 TRAV12-2A0A075B6T6 113 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 IGLV3-32A0A0A0MS00 114 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 KLF7O75840 302 aaPredicted RBP1.6□□□□□ -2.15
OTUD4-208ENST00000509620 APODP05090 189 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 ZNF25P17030 456 aaPredicted RBP1.6□□□□□ -2.15
OTUD4-208ENST00000509620 S100PP25815 95 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 POLR2JP52435 117 aaKnown RBP1.6□□□□□ -2.15
OTUD4-208ENST00000509620 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 LINC00299Q6ZSB3 139 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.6□□□□□ -2.15
OTUD4-208ENST00000509620 DYNLRB2Q8TF09 96 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 COPS9Q8WXC6 57 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 CYSTM1Q9H1C7 97 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 UHRF1BP1LA0JNW5 1464 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 GRIN2AQ12879 1464 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 MYH6P13533 1939 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 MYH13Q9UKX3 1938 aa1.6□□□□□ -2.15
OTUD4-208ENST00000509620 SMG6Q86US8 1419 aaKnown RBP1.59□□□□□ -2.15
OTUD4-208ENST00000509620 CECR2Q9BXF3 1484 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 LOC110117498A0A087WWA1 95 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 TRAV2A0A0B4J234 112 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 A0A0J9YY99 117 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 TMEM30CPA0ZSE6 113 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 MIF4GDA9UHW6 222 aaKnown RBP1.59□□□□□ -2.15
OTUD4-208ENST00000509620 JMJD7-PLA2G4BH0Y9G9 81 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 HCRTO43612 131 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 PPYP01298 95 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 AKAIN1P0CW23 69 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 FGF7P21781 194 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 MRPS10P82664 201 aaKnown RBP1.59□□□□□ -2.15
OTUD4-208ENST00000509620 UNQ5815/PRO19632Q6UWF5 114 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 LINC00322Q6ZN03 302 aaPredicted RBP1.59□□□□□ -2.15
OTUD4-208ENST00000509620 PDCD10Q9BUL8 212 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 WFDC10AQ9H1F0 79 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 ZFP30Q9Y2G7 519 aa1.59□□□□□ -2.15
OTUD4-208ENST00000509620 USP54Q70EL1 1684 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 CHD3Q12873 2000 aaKnown RBP1.58□□□□□ -2.16
OTUD4-208ENST00000509620 IGKV3-7A0A075B6H7 116 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 TRBV6-7A0A0A0MS04 114 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 TRAV17A0A0B4J275 112 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 F6UZH7 168 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 PITX3O75364 302 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 IL7P13232 177 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 IL9P15248 144 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 HIST1H1DP16402 221 aaKnown RBP1.58□□□□□ -2.16
OTUD4-208ENST00000509620 VSTM2AQ8TAG5 236 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 SNRNP25Q9BV90 132 aaKnown RBP1.58□□□□□ -2.16
OTUD4-208ENST00000509620 RERGLQ9H628 205 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 NINQ8N4C6 2090 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 ARFGEF3Q5TH69 2177 aa1.58□□□□□ -2.16
OTUD4-208ENST00000509620 MUC4Q99102 2169 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 TRAV23DV6A0A075B6W5 121 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 IGKV2-40A0A087WW87 121 aaPredicted RBP1.57□□□□□ -2.16
OTUD4-208ENST00000509620 IGKV2D-40P01614 121 aaPredicted RBP1.57□□□□□ -2.16
OTUD4-208ENST00000509620 GYPBP06028 91 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 KRTAP21-3Q3LHN1 58 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 OCIAD2Q56VL3 154 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 GDF5OSQ5U4N7 250 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 OR2T2Q6IF00 324 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 LYPD5Q6UWN5 251 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 PLPP5Q8NEB5 264 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 PPDPFLQ8WWR9 84 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 SEC11CQ9BY50 192 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 AGPAT4-IT1Q9H0P7 198 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 SCN3BQ9NY72 215 aa1.57□□□□□ -2.16
OTUD4-208ENST00000509620 BOKQ9UMX3 212 aaPredicted RBP1.57□□□□□ -2.16
OTUD4-208ENST00000509620 EXPH5Q8NEV8 1989 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 LOC100130705A0A1B0GUX0 176 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 CORTO00230 105 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 IGHV3-30P01768 117 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 IGKCP01834 107 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 IGHV3-30-5P0DP03 117 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 IQCJQ1A5X6 159 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 SPRNQ5BIV9 151 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 CSAG1Q6PB30 78 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 PP6455Q8WZ26 134 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 SPTSSAQ969W0 71 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 LINC00526Q96FQ7 95 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 MRPL57Q9BQC6 102 aaKnown RBP1.56□□□□□ -2.16
OTUD4-208ENST00000509620 TMEM242Q9NWH2 141 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 MRPL36Q9P0J6 103 aaKnown RBP1.56□□□□□ -2.16
OTUD4-208ENST00000509620 CR1P17927 2039 aa1.56□□□□□ -2.16
OTUD4-208ENST00000509620 INTS1Q8N201 2190 aaKnown RBP1.55□□□□□ -2.16
OTUD4-208ENST00000509620 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.55□□□□□ -2.16
OTUD4-208ENST00000509620 TRPM7Q96QT4 1865 aa1.55□□□□□ -2.16
OTUD4-208ENST00000509620 CCDC179H3BU77 68 aa1.55□□□□□ -2.16
OTUD4-208ENST00000509620 SNCGO76070 127 aa1.55□□□□□ -2.16
OTUD4-208ENST00000509620 IL5P05113 134 aa1.55□□□□□ -2.16
OTUD4-208ENST00000509620 PRB4P10163 310 aaPredicted RBP1.55□□□□□ -2.16
OTUD4-208ENST00000509620 PIPP12273 146 aaPredicted RBP1.55□□□□□ -2.16
OTUD4-208ENST00000509620 BTG2P78543 158 aa1.55□□□□□ -2.16
OTUD4-208ENST00000509620 SPATA45Q537H7 98 aa1.55□□□□□ -2.16
OTUD4-208ENST00000509620 SPANXN1Q5VSR9 72 aa1.55□□□□□ -2.16
OTUD4-208ENST00000509620 ATG5Q9H1Y0 275 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms