RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 H3BRM9 83 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 J3QLI3 93 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 AVPP01185 164 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 GATA1P15976 413 aaPredicted RBP12.93□□□□□ -0.34
LIN54-204ENST00000505397 PSMG4Q5JS54 123 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 Q8N8P6 123 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 HHLA3Q9XRX5 114 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 KMT2BQ9UMN6 2715 aaPredicted RBP12.93□□□□□ -0.34
LIN54-204ENST00000505397 CELSR1Q9NYQ6 3014 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 IGHV4-4A0A075B6R2 117 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 J3QKU1 62 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 PCP2Q8IVA1 136 aa12.93□□□□□ -0.34
LIN54-204ENST00000505397 EVI2AP22794 236 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 C19orf54Q5BKX5 351 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 TMEM78Q5T7P6 136 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 IGHV3OR16-13A0A075B7E8 117 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 IGHV3-74A0A0B4J1X5 117 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 A6NDN8 102 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 PLA2G2AP14555 144 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 CST9LQ9H4G1 147 aa12.92□□□□□ -0.34
LIN54-204ENST00000505397 TRGV3P03979 118 aa12.91□□□□□ -0.34
LIN54-204ENST00000505397 C9orf118A6NHY6 69 aa12.91□□□□□ -0.34
LIN54-204ENST00000505397 NRACQ8N912 160 aa12.91□□□□□ -0.34
LIN54-204ENST00000505397 OR2K2Q8NGT1 345 aa12.91□□□□□ -0.34
LIN54-204ENST00000505397 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
LIN54-204ENST00000505397 PCP4P48539 62 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 TCTAP57738 103 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 TRAV41A0A0B4J266 112 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 A6NDX4 124 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 NMUP48645 174 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 CRIP2P52943 208 aaPredicted RBP12.9□□□□□ -0.34
LIN54-204ENST00000505397 ATP5G2Q06055 141 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 UFSP1Q6NVU6 142 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 CR1P17927 2039 aa12.9□□□□□ -0.34
LIN54-204ENST00000505397 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.35
LIN54-204ENST00000505397 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
LIN54-204ENST00000505397 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
LIN54-204ENST00000505397 GAGE12BA1L429 117 aa12.89□□□□□ -0.35
LIN54-204ENST00000505397 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
LIN54-204ENST00000505397 Q96MF0 132 aa12.89□□□□□ -0.35
LIN54-204ENST00000505397 IGKV2D-26A0A0A0MRZ7 120 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 OCIAD2Q56VL3 154 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 Q6ZQT7 251 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 HIGD1BQ9P298 99 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 LENEPQ9Y5L5 61 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 FAM223BA6NKX1 122 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 ATP5LO75964 103 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 IGHV4-31P0DP07 118 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 FAM223AQ8IWN6 122 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
LIN54-204ENST00000505397 IGKCP01834 107 aa12.87□□□□□ -0.35
LIN54-204ENST00000505397 LINC00527Q9UJ94 153 aa12.87□□□□□ -0.35
LIN54-204ENST00000505397 TENM4Q6N022 2769 aa12.87□□□□□ -0.35
LIN54-204ENST00000505397 PRSS1P07477 247 aa12.87□□□□□ -0.35
LIN54-204ENST00000505397 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
LIN54-204ENST00000505397 SMIM15Q7Z3B0 74 aa12.87□□□□□ -0.35
LIN54-204ENST00000505397 CREBBPQ92793 2442 aa12.87□□□□□ -0.35
LIN54-204ENST00000505397 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
LIN54-204ENST00000505397 PRR9Q5T870 116 aa12.86□□□□□ -0.35
LIN54-204ENST00000505397 C9orf139Q6ZV77 190 aa12.86□□□□□ -0.35
LIN54-204ENST00000505397 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
LIN54-204ENST00000505397 ZFHX3Q15911 3703 aa12.86□□□□□ -0.35
LIN54-204ENST00000505397 IGHG2P01859 326 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 IGF1P05019 195 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 LAGE3Q14657 143 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 C16orf92Q96LL3 132 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 FOXC2Q99958 501 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 APCP25054 2843 aa12.85□□□□□ -0.35
LIN54-204ENST00000505397 DPM2O94777 84 aa12.84□□□□□ -0.35
LIN54-204ENST00000505397 GTF2H5Q6ZYL4 71 aa12.84□□□□□ -0.35
LIN54-204ENST00000505397 A0A0G2JLM5 398 aa12.84□□□□□ -0.35
LIN54-204ENST00000505397 H3BUT2 72 aa12.84□□□□□ -0.35
LIN54-204ENST00000505397 K7EP34 96 aa12.83□□□□□ -0.35
LIN54-204ENST00000505397 SOCS3O14543 225 aa12.83□□□□□ -0.35
LIN54-204ENST00000505397 SPANXN1Q5VSR9 72 aa12.83□□□□□ -0.35
LIN54-204ENST00000505397 MRAP2Q96G30 205 aa12.83□□□□□ -0.35
LIN54-204ENST00000505397 AP1S3Q96PC3 154 aa12.83□□□□□ -0.35
LIN54-204ENST00000505397 UFC1Q9Y3C8 167 aa12.83□□□□□ -0.36
LIN54-204ENST00000505397 PRRC2AP48634 2157 aaKnown RBP12.83□□□□□ -0.36
LIN54-204ENST00000505397 IGHV4-59P01825 116 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 ARL3P36405 182 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 BLCAPP62952 87 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 C21orf62-AS1Q17RA5 79 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 ZFAND2AQ8N6M9 145 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 LINC00477Q96M19 166 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 ZANQ9Y493 2812 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 BRI3O95415 125 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 ZC2HC1BQ5TFG8 222 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 HIST2H2BCQ6DN03 193 aa12.82□□□□□ -0.36
LIN54-204ENST00000505397 UNQ9165/PRO28630Q6UXU0 137 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms