RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TMEM106BQ9NUM4 274 aa1.95□□□□□ -2.1
HMGB1P22-201ENST00000505315 SCRIBQ14160 1630 aa1.95□□□□□ -2.1
HMGB1P22-201ENST00000505315 MYO16Q9Y6X6 1858 aa1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 KRTAP4-8A0A0G2JLE6 195 aa1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 CCL16O15467 120 aa1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 P0C880 135 aa1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 CBLN1P23435 193 aa1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 REG4Q9BYZ8 158 aa1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 V9GYS6 101 aa1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 COL16A1Q07092 1604 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P22-201ENST00000505315 ADGRB1O14514 1584 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 CUL7Q14999 1698 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 GPR179Q6PRD1 2367 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 MAPKBP1O60336 1514 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 ZFYVE16Q7Z3T8 1539 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 WDR97A6NE52 1622 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 TRAV23DV6A0A075B6W5 121 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 TMEM262E9PQX1 116 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 PPYP01298 95 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 LINC00032P0C843 101 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 KRTAP10-12P60413 245 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 C10orf55Q5SWW7 151 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 HCP5Q6MZN7 132 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 COA5Q86WW8 74 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 LIMD2Q9BT23 127 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 VAMP8Q9BV40 100 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 DPY30Q9C005 99 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 ATG5Q9H1Y0 275 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 KIAA2026Q5HYC2 2103 aa1.93□□□□□ -2.1
HMGB1P22-201ENST00000505315 TP53BP1Q12888 1972 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 TRBV6-5A0A0K0K1A5 114 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 UBE2L5PA0A1B0GUS4 154 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 TRBV6-4A0A1B0GX49 114 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 A0A1W2PNU3 283 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 ATP5EP56381 51 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 CNBPP62633 177 aaKnown RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 UBE2L3P68036 154 aaKnown RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 DCDP81605 110 aaKnown RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 LYPD5Q6UWN5 251 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 C5orf38Q86SI9 138 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 Q8N8P6 123 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 PATE1Q8WXA2 126 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 MRPL35Q9NZE8 188 aaKnown RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 MRPL36Q9P0J6 103 aaKnown RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 PRO0461Q9UI25 63 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 NRKQ7Z2Y5 1582 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 USP54Q70EL1 1684 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 ZFC3H1O60293 1989 aaKnown RBP1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 ARHGAP32A7KAX9 2087 aa1.92□□□□□ -2.1
HMGB1P22-201ENST00000505315 NSD3Q9BZ95 1437 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 KIF13AQ9H1H9 1805 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 DIDO1Q9BTC0 2240 aaKnown RBP1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 TANC2Q9HCD6 1990 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 COL1A2P08123 1366 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 C9orf116Q5BN46 136 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 KRTAP4-9Q9BYQ8 210 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 WFDC10AQ9H1F0 79 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 DAPK1P53355 1430 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
HMGB1P22-201ENST00000505315 TRBV10-1A0A0K0K1A3 114 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 TRBV10-3A0A0K0K1G6 114 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 JMJD7-PLA2G4BH0Y9G9 81 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 GNGT2O14610 69 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 IGHV3-33P01772 117 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 KRTAP26-1Q6PEX3 210 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 LINC00299Q6ZSB3 139 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 C4orf33Q8N1A6 199 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 MYOZ3Q8TDC0 251 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 IFI27L1Q96BM0 104 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 KRTAP4-11Q9BYQ6 195 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 TMEM14CQ9P0S9 112 aa1.9□□□□□ -2.11
HMGB1P22-201ENST00000505315 RB1CC1Q8TDY2 1594 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 COL24A1Q17RW2 1714 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 PTPRBP23467 1997 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 PLXNA3P51805 1871 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 TRAV13-2A0A0B4J235 113 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 RBAKDNA6NC62 111 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 SSSCA1O60232 199 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 GNG11P61952 73 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 MPV17LQ2QL34 196 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 BRD3OSQ6XYD6 125 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 DPH3P1Q9H4G8 78 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 LAMB4A4D0S4 1761 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 HELZP42694 1942 aaKnown RBP1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 PRRC2AP48634 2157 aaKnown RBP1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 TTC37Q6PGP7 1564 aa1.89□□□□□ -2.11
HMGB1P22-201ENST00000505315 DISP1Q96F81 1524 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 MYH6P13533 1939 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 TRGV2A0A075B6R0 118 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 TRAV12-3A0A0B4J271 114 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 A0A1B0GVY2 172 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 NUPR2A6NF83 97 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 J3QRE1 110 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 NUPR1O60356 82 aa1.88□□□□□ -2.11
HMGB1P22-201ENST00000505315 KRTAP10-9P60411 292 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms