RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 C19orf73Q9NVV2 129 aa6.71□□□□□ -1.34
NR1I3-216ENST00000502848 TP53TG3Q9ULZ0 132 aa6.71□□□□□ -1.34
NR1I3-216ENST00000502848 MAST4O15021 2626 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 IGKV3D-20A0A0C4DH25 116 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 PHOX2AO14813 284 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 RNASE4P34096 147 aaKnown RBP6.7□□□□□ -1.34
NR1I3-216ENST00000502848 ASIPP42127 132 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 TCL1AP56279 114 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 CACNG7P62955 275 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 PRR9Q5T870 116 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 GFI1BQ5VTD9 330 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 HIST2H2BDQ6DRA6 164 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 FAM159AQ6UWV7 190 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 ZNF493Q6ZR52 646 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 TMEM136Q6ZRR5 245 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 C1QTNF4Q9BXJ3 329 aa6.7□□□□□ -1.34
NR1I3-216ENST00000502848 INSP01308 110 aa6.69□□□□□ -1.34
NR1I3-216ENST00000502848 PRR31Q5SQ13 230 aa6.69□□□□□ -1.34
NR1I3-216ENST00000502848 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
NR1I3-216ENST00000502848 ZNF575Q86XF7 245 aa6.69□□□□□ -1.34
NR1I3-216ENST00000502848 NDUFAF3Q9BU61 184 aa6.69□□□□□ -1.34
NR1I3-216ENST00000502848 SCRT2Q9NQ03 307 aa6.69□□□□□ -1.34
NR1I3-216ENST00000502848 C11orf21Q9P2W6 132 aa6.69□□□□□ -1.34
NR1I3-216ENST00000502848 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 KNCNA6PVL3 124 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 SNURFLB1AK76 121 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 NXPH4O95158 308 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 TRGC2P03986 189 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 DEFB1P60022 68 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
NR1I3-216ENST00000502848 LYZL1Q6UWQ5 148 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 FRZBQ92765 325 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 PTH2Q96A98 100 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 SELENOKQ9Y6D0 94 aa6.68□□□□□ -1.34
NR1I3-216ENST00000502848 SETD2Q9BYW2 2564 aaPredicted RBP6.68□□□□□ -1.34
NR1I3-216ENST00000502848 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.34
NR1I3-216ENST00000502848 JMJD1CQ15652 2540 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 KIR2DL5BA0A0G2JN68 375 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 KIR2DL5BA0A0G2JPC4 375 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 M0R2Z0 102 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 CRXO43186 299 aaPredicted RBP6.67□□□□□ -1.34
NR1I3-216ENST00000502848 ARMS2P0C7Q2 107 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 S100A4P26447 101 aaKnown RBP6.67□□□□□ -1.34
NR1I3-216ENST00000502848 SPINK13Q1W4C9 94 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
NR1I3-216ENST00000502848 KIR2DL5AQ8N109 375 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 KIR2DL5BQ8NHK3 375 aa6.67□□□□□ -1.34
NR1I3-216ENST00000502848 MRPL18Q9H0U6 180 aaKnown RBP6.67□□□□□ -1.34
NR1I3-216ENST00000502848 TRAV12-3A0A0B4J271 114 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 RBMY1BA6NDE4 496 aaKnown RBP6.66□□□□□ -1.34
NR1I3-216ENST00000502848 RBMY1EA6NEQ0 496 aaKnown RBP6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 APCSP02743 223 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 CD7P09564 240 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 RBMY1DP0C7P1 496 aaKnown RBP6.66□□□□□ -1.34
NR1I3-216ENST00000502848 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 GZMBP10144 247 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 EGFEM1PQ0D2K5 195 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
NR1I3-216ENST00000502848 SMIM15Q7Z3B0 74 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 TMEM191AQ9H0A3 160 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 LAMTOR2Q9Y2Q5 125 aa6.66□□□□□ -1.34
NR1I3-216ENST00000502848 TEP1Q99973 2627 aaKnown RBP6.65□□□□□ -1.34
NR1I3-216ENST00000502848 TMSB15BA0A087X1C1 80 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 IGKV3-20P01619 116 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 PPBPP02775 128 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 S100A6P06703 90 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 FABP9Q0Z7S8 132 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 ZFP82Q8N141 532 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 SPXQ9BT56 116 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 TPPP3Q9BW30 176 aa6.65□□□□□ -1.34
NR1I3-216ENST00000502848 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
NR1I3-216ENST00000502848 ATRQ13535 2644 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 GRIFINA4D1Z8 144 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 RNASE3P12724 160 aaKnown RBP6.64□□□□□ -1.35
NR1I3-216ENST00000502848 NTF3P20783 257 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 CAMPP49913 170 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 RAB4BP61018 213 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 ZNF415Q09FC8 603 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 Q0VG73 95 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
NR1I3-216ENST00000502848 TWIST1Q15672 202 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms