RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 STAG3L3P0CL85 134 aa13.84□□□□□ -0.19
LMBR1-219ENST00000498034 ATP6V0CP27449 155 aa13.84□□□□□ -0.19
LMBR1-219ENST00000498034 OR4C5Q8NGB2 326 aa13.84□□□□□ -0.19
LMBR1-219ENST00000498034 OR2G3Q8NGZ4 309 aa13.84□□□□□ -0.19
LMBR1-219ENST00000498034 PCNPQ8WW12 178 aaKnown RBP13.84□□□□□ -0.19
LMBR1-219ENST00000498034 RAB24Q969Q5 203 aa13.84□□□□□ -0.19
LMBR1-219ENST00000498034 ORM1P02763 201 aa13.83□□□□□ -0.2
LMBR1-219ENST00000498034 WFDC10BQ8IUB3 73 aa13.83□□□□□ -0.2
LMBR1-219ENST00000498034 AQP10Q96PS8 301 aa13.83□□□□□ -0.2
LMBR1-219ENST00000498034 MED28Q9H204 178 aa13.83□□□□□ -0.2
LMBR1-219ENST00000498034 SDF2L1Q9HCN8 221 aa13.83□□□□□ -0.2
LMBR1-219ENST00000498034 BATF3Q9NR55 127 aa13.83□□□□□ -0.2
LMBR1-219ENST00000498034 LOC100131303A0A0U1RQF7 123 aa13.82□□□□□ -0.2
LMBR1-219ENST00000498034 GCHFRP30047 84 aa13.82□□□□□ -0.2
LMBR1-219ENST00000498034 Q5BKY6 102 aa13.82□□□□□ -0.2
LMBR1-219ENST00000498034 KCNS1Q96KK3 526 aa13.82□□□□□ -0.2
LMBR1-219ENST00000498034 PSMG3Q9BT73 122 aaPredicted RBP13.82□□□□□ -0.2
LMBR1-219ENST00000498034 LY96Q9Y6Y9 160 aa13.82□□□□□ -0.2
LMBR1-219ENST00000498034 TCRAP04437 139 aa13.81□□□□□ -0.2
LMBR1-219ENST00000498034 FUSP35637 526 aaKnown RBP eCLIP13.81□□□□□ -0.2
LMBR1-219ENST00000498034 ZNF80P51504 273 aaPredicted RBP13.81□□□□□ -0.2
LMBR1-219ENST00000498034 C5orf17Q8NAS9 161 aa13.81□□□□□ -0.2
LMBR1-219ENST00000498034 SUN5Q8TC36 379 aa13.81□□□□□ -0.2
LMBR1-219ENST00000498034 ASB13Q8WXK3 278 aa13.81□□□□□ -0.2
LMBR1-219ENST00000498034 NDFIP1Q9BT67 221 aa13.81□□□□□ -0.2
LMBR1-219ENST00000498034 SH3BGRL3Q9H299 93 aa13.81□□□□□ -0.2
LMBR1-219ENST00000498034 SERTM2A0A1B0GWG4 89 aa13.8□□□□□ -0.2
LMBR1-219ENST00000498034 C9JCJ5 164 aa13.8□□□□□ -0.2
LMBR1-219ENST00000498034 PTTG1O95997 202 aa13.8□□□□□ -0.2
LMBR1-219ENST00000498034 TXNDC17Q9BRA2 123 aa13.8□□□□□ -0.2
LMBR1-219ENST00000498034 C11orf21Q9P2W6 132 aa13.8□□□□□ -0.2
LMBR1-219ENST00000498034 PSG8Q9UQ74 426 aa13.8□□□□□ -0.2
LMBR1-219ENST00000498034 APOBP04114 4563 aaKnown RBP13.79□□□□□ -0.2
LMBR1-219ENST00000498034 TRAV9-2A0A087WT02 112 aa13.79□□□□□ -0.2
LMBR1-219ENST00000498034 ERVFC1-1P60608 527 aa13.79□□□□□ -0.2
LMBR1-219ENST00000498034 SUMO1P63165 101 aaKnown RBP13.79□□□□□ -0.2
LMBR1-219ENST00000498034 SERF2P84101 59 aa13.79□□□□□ -0.2
LMBR1-219ENST00000498034 Q8N1X5 172 aa13.79□□□□□ -0.2
LMBR1-219ENST00000498034 IGLV2-11P01706 119 aa13.78□□□□□ -0.2
LMBR1-219ENST00000498034 MBP02144 154 aa13.78□□□□□ -0.2
LMBR1-219ENST00000498034 GATA1P15976 413 aaPredicted RBP13.78□□□□□ -0.2
LMBR1-219ENST00000498034 NFE4Q86UQ8 179 aa13.78□□□□□ -0.2
LMBR1-219ENST00000498034 DNAH5Q8TE73 4624 aa13.78□□□□□ -0.2
LMBR1-219ENST00000498034 GGTLC3B5MD39 225 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 K7EQM0 130 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 EREGO14944 169 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 CXorf1O96002 111 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 GCGP01275 180 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 EVI2AP22794 236 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 PRNTQ86SH4 94 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 TMEM75Q8N9X5 138 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 ACTR3CQ9C0K3 210 aaPredicted RBP13.77□□□□□ -0.21
LMBR1-219ENST00000498034 PGPEP1Q9NXJ5 209 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 MSRB1Q9NZV6 116 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 EPDR1Q9UM22 224 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 TNFSF18Q9UNG2 199 aa13.77□□□□□ -0.21
LMBR1-219ENST00000498034 TAAR5O14804 337 aa13.76□□□□□ -0.21
LMBR1-219ENST00000498034 DNAH10OSP0CZ25 163 aa13.76□□□□□ -0.21
LMBR1-219ENST00000498034 FLI1Q01543 452 aaPredicted RBP13.76□□□□□ -0.21
LMBR1-219ENST00000498034 ZNF876PQ49A33 203 aa13.76□□□□□ -0.21
LMBR1-219ENST00000498034 DPPA3Q6W0C5 159 aa13.76□□□□□ -0.21
LMBR1-219ENST00000498034 NHLRC2Q8NBF2 726 aa13.76□□□□□ -0.21
LMBR1-219ENST00000498034 SCRT2Q9NQ03 307 aa13.76□□□□□ -0.21
LMBR1-219ENST00000498034 TMEM167BQ9NRX6 74 aa13.76□□□□□ -0.21
LMBR1-219ENST00000498034 FBLL1A6NHQ2 334 aaKnown RBP13.75□□□□□ -0.21
LMBR1-219ENST00000498034 RS1O15537 224 aa13.75□□□□□ -0.21
LMBR1-219ENST00000498034 PFN1P07737 140 aaKnown RBP13.75□□□□□ -0.21
LMBR1-219ENST00000498034 GIPP09681 153 aaPredicted RBP13.75□□□□□ -0.21
LMBR1-219ENST00000498034 SMUG1Q53HV7 270 aa13.75□□□□□ -0.21
LMBR1-219ENST00000498034 CFAP126Q5VTH2 177 aa13.75□□□□□ -0.21
LMBR1-219ENST00000498034 RPL7L1Q6DKI1 246 aaKnown RBP13.75□□□□□ -0.21
LMBR1-219ENST00000498034 A0A087WTM6 91 aa13.74□□□□□ -0.21
LMBR1-219ENST00000498034 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
LMBR1-219ENST00000498034 RNF222A6NCQ9 220 aa13.74□□□□□ -0.21
LMBR1-219ENST00000498034 K7EP13 123 aa13.74□□□□□ -0.21
LMBR1-219ENST00000498034 CYB561D1Q8N8Q1 229 aa13.74□□□□□ -0.21
LMBR1-219ENST00000498034 SLC25A29Q8N8R3 303 aa13.74□□□□□ -0.21
LMBR1-219ENST00000498034 INO80EQ8NBZ0 244 aaPredicted RBP13.74□□□□□ -0.21
LMBR1-219ENST00000498034 C9orf85Q96MD7 179 aa13.74□□□□□ -0.21
LMBR1-219ENST00000498034 FXYD6-FXYD2A0A087WZ82 144 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 CRYGDP07320 174 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 PPT1P50897 306 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 ZNF726P1Q15940 193 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 ZFP69Q49AA0 526 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 SH2D6Q7Z4S9 175 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 LINC00479Q96M42 142 aa13.73□□□□□ -0.21
LMBR1-219ENST00000498034 TRAV34A0A0B4J273 112 aa13.72□□□□□ -0.21
LMBR1-219ENST00000498034 TIRAPP58753 221 aa13.72□□□□□ -0.21
LMBR1-219ENST00000498034 BORCS7-ASMTA0A0B4J1R7 106 aa13.71□□□□□ -0.21
LMBR1-219ENST00000498034 A0A1W2PRE2 83 aa13.71□□□□□ -0.21
LMBR1-219ENST00000498034 RNASE3P12724 160 aaKnown RBP13.71□□□□□ -0.21
LMBR1-219ENST00000498034 ZNF506Q5JVG8 444 aa13.71□□□□□ -0.21
LMBR1-219ENST00000498034 CDPF1Q6NVV7 123 aa13.71□□□□□ -0.21
LMBR1-219ENST00000498034 PRADC1Q9BSG0 188 aa13.71□□□□□ -0.21
LMBR1-219ENST00000498034 IGHV3-38A0A0C4DH36 116 aa13.7□□□□□ -0.22
LMBR1-219ENST00000498034 TRBV6-4A0A1B0GX49 114 aa13.7□□□□□ -0.22
LMBR1-219ENST00000498034 CIDEAO60543 219 aa13.7□□□□□ -0.22
LMBR1-219ENST00000498034 RHOHQ15669 191 aa13.7□□□□□ -0.22
LMBR1-219ENST00000498034 SAPCD1Q5SSQ6 148 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms