RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 EMP1P54849 157 aa14.42□□□□□ -0.1
CTSD-206ENST00000497544 FAM162BQ5T6X4 162 aa14.42□□□□□ -0.1
CTSD-206ENST00000497544 ZNF493Q6ZR52 646 aa14.42□□□□□ -0.1
CTSD-206ENST00000497544 SMIM12Q96EX1 92 aa14.42□□□□□ -0.1
CTSD-206ENST00000497544 MGST1P10620 155 aaKnown RBP14.41□□□□□ -0.1
CTSD-206ENST00000497544 C16orf74Q96GX8 76 aa14.41□□□□□ -0.1
CTSD-206ENST00000497544 KCNS1Q96KK3 526 aa14.41□□□□□ -0.1
CTSD-206ENST00000497544 ZNF727A8MUV8 499 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 C9JCJ5 164 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 C9JQL5 133 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 SH2D1AO60880 128 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 CRIP1P50238 77 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 ANXA2RQ3ZCQ2 193 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 TMEM263Q8WUH6 116 aaKnown RBP14.4□□□□□ -0.1
CTSD-206ENST00000497544 SMIM7Q9BQ49 75 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 C11orf68Q9H3H3 251 aaKnown RBP14.4□□□□□ -0.1
CTSD-206ENST00000497544 BIN3Q9NQY0 253 aa14.4□□□□□ -0.1
CTSD-206ENST00000497544 TRBV20OR9-2A0A075B6H5 130 aa14.39□□□□□ -0.11
CTSD-206ENST00000497544 IGLV2-8P01709 118 aa14.39□□□□□ -0.11
CTSD-206ENST00000497544 ORM1P02763 201 aa14.39□□□□□ -0.11
CTSD-206ENST00000497544 PRR27Q6MZM9 219 aa14.39□□□□□ -0.11
CTSD-206ENST00000497544 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
CTSD-206ENST00000497544 TP53TG3Q9ULZ0 132 aa14.39□□□□□ -0.11
CTSD-206ENST00000497544 TRGV11A0A075B6L2 103 aa14.38□□□□□ -0.11
CTSD-206ENST00000497544 PGPEP1LA6NFU8 196 aa14.38□□□□□ -0.11
CTSD-206ENST00000497544 TDRG1Q3Y452 100 aa14.38□□□□□ -0.11
CTSD-206ENST00000497544 FAM74A3Q4VXF1 159 aa14.38□□□□□ -0.11
CTSD-206ENST00000497544 OCC1Q8TAD7 63 aa14.38□□□□□ -0.11
CTSD-206ENST00000497544 RNASE8Q8TDE3 154 aaKnown RBP14.38□□□□□ -0.11
CTSD-206ENST00000497544 DAZAP1Q96EP5 407 aaKnown RBP14.38□□□□□ -0.11
CTSD-206ENST00000497544 SNURFLB1AK76 121 aa14.37□□□□□ -0.11
CTSD-206ENST00000497544 GNRH2O43555 120 aa14.37□□□□□ -0.11
CTSD-206ENST00000497544 SOHLH1Q5JUK2 328 aa14.37□□□□□ -0.11
CTSD-206ENST00000497544 C11orf21Q9P2W6 132 aa14.37□□□□□ -0.11
CTSD-206ENST00000497544 IBA57Q5T440 356 aaKnown RBP14.36□□□□□ -0.11
CTSD-206ENST00000497544 EDA2RQ9HAV5 297 aa14.36□□□□□ -0.11
CTSD-206ENST00000497544 GSN-AS1Q9NRJ2 163 aa14.36□□□□□ -0.11
CTSD-206ENST00000497544 TIMM8BQ9Y5J9 83 aaPredicted RBP14.36□□□□□ -0.11
CTSD-206ENST00000497544 LY96Q9Y6Y9 160 aa14.36□□□□□ -0.11
CTSD-206ENST00000497544 LINC00862A6NCI5 91 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 CXorf65A6NEN9 183 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 B4DEV8 164 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 SPART-AS1P0CW21 52 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 ZNF415Q09FC8 603 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 OR5I1Q13606 314 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 TMEM241Q24JQ0 296 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 UQCC3Q6UW78 93 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 COMMD7Q86VX2 200 aa14.35□□□□□ -0.11
CTSD-206ENST00000497544 IGKV3D-20A0A0C4DH25 116 aa14.34□□□□□ -0.11
CTSD-206ENST00000497544 M0R036 132 aa14.34□□□□□ -0.11
CTSD-206ENST00000497544 TYMSP04818 313 aa14.34□□□□□ -0.11
CTSD-206ENST00000497544 FAM222AQ5U5X8 452 aa14.34□□□□□ -0.11
CTSD-206ENST00000497544 ZFAND6Q6FIF0 208 aa14.34□□□□□ -0.11
CTSD-206ENST00000497544 C11orf45Q8TAV5 145 aa14.34□□□□□ -0.11
CTSD-206ENST00000497544 NOP10Q9NPE3 64 aaKnown RBP14.34□□□□□ -0.11
CTSD-206ENST00000497544 TEX48A0A1B0GUV7 120 aa14.33□□□□□ -0.12
CTSD-206ENST00000497544 PLAC8L1A1L4L8 177 aa14.33□□□□□ -0.12
CTSD-206ENST00000497544 C11orf72Q8NBR9 251 aa14.33□□□□□ -0.12
CTSD-206ENST00000497544 MDFICQ9P1T7 246 aa14.33□□□□□ -0.12
CTSD-206ENST00000497544 DKK2Q9UBU2 259 aa14.33□□□□□ -0.12
CTSD-206ENST00000497544 PLECQ15149 4684 aaKnown RBP14.33□□□□□ -0.12
CTSD-206ENST00000497544 IGHV3-16A0A0C4DH30 117 aa14.32□□□□□ -0.12
CTSD-206ENST00000497544 KRBOX1C9JBD0 128 aa14.32□□□□□ -0.12
CTSD-206ENST00000497544 SFTA3P0C7M3 94 aa14.32□□□□□ -0.12
CTSD-206ENST00000497544 S100A4P26447 101 aaKnown RBP14.32□□□□□ -0.12
CTSD-206ENST00000497544 TCL1AP56279 114 aa14.32□□□□□ -0.12
CTSD-206ENST00000497544 LINC01559Q495D7 138 aa14.32□□□□□ -0.12
CTSD-206ENST00000497544 NAT8Q9UHE5 227 aa14.32□□□□□ -0.12
CTSD-206ENST00000497544 TMSB15BA0A087X1C1 80 aa14.31□□□□□ -0.12
CTSD-206ENST00000497544 LYRM9A8MSI8 78 aa14.31□□□□□ -0.12
CTSD-206ENST00000497544 K7EN84 100 aa14.31□□□□□ -0.12
CTSD-206ENST00000497544 P01737 135 aa14.31□□□□□ -0.12
CTSD-206ENST00000497544 DAZ2Q13117 558 aaKnown RBP14.31□□□□□ -0.12
CTSD-206ENST00000497544 IL17DQ8TAD2 202 aa14.31□□□□□ -0.12
CTSD-206ENST00000497544 CELA1Q9UNI1 258 aa14.31□□□□□ -0.12
CTSD-206ENST00000497544 GRIFINA4D1Z8 144 aa14.3□□□□□ -0.12
CTSD-206ENST00000497544 C19orf71A6NCJ1 209 aa14.3□□□□□ -0.12
CTSD-206ENST00000497544 ASIPP42127 132 aa14.3□□□□□ -0.12
CTSD-206ENST00000497544 LINC01551Q86U37 167 aa14.3□□□□□ -0.12
CTSD-206ENST00000497544 NUDT10Q8NFP7 164 aa14.3□□□□□ -0.12
CTSD-206ENST00000497544 NUDT11Q96G61 164 aa14.3□□□□□ -0.12
CTSD-206ENST00000497544 SPXQ9BT56 116 aa14.3□□□□□ -0.12
CTSD-206ENST00000497544 RPL19P84098 196 aaKnown RBP14.29□□□□□ -0.12
CTSD-206ENST00000497544 OR2D3Q8NGH3 330 aa14.29□□□□□ -0.12
CTSD-206ENST00000497544 NANOS2P60321 138 aaKnown RBP14.28□□□□□ -0.12
CTSD-206ENST00000497544 RPS20P60866 119 aaKnown RBP14.28□□□□□ -0.12
CTSD-206ENST00000497544 DAD1P61803 113 aa14.28□□□□□ -0.12
CTSD-206ENST00000497544 RPL23P62829 140 aaKnown RBP14.28□□□□□ -0.12
CTSD-206ENST00000497544 RNASE7Q9H1E1 156 aaKnown RBP14.28□□□□□ -0.12
CTSD-206ENST00000497544 TRGV1A0A0A0MS02 117 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 XKRY2A2RUG3 117 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 DEFB130BP0DP73 79 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 DEFB130AP0DP74 79 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 ERVFC1-1P60608 527 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 ADIRFQ15847 76 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 DNLZQ5SXM8 178 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 ALMS1Q8TCU4 4167 aa14.27□□□□□ -0.13
CTSD-206ENST00000497544 GAGE12BA1L429 117 aa14.26□□□□□ -0.13
CTSD-206ENST00000497544 TMEM218A2RU14 115 aa14.26□□□□□ -0.13
CTSD-206ENST00000497544 M0R2P5 195 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms