RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PRNTQ86SH4 94 aa22.96■■□□□ 1.27
CBX4-203ENST00000494546 RASL10AQ92737 203 aa22.96■■□□□ 1.27
CBX4-203ENST00000494546 HHLA3Q9XRX5 114 aa22.96■■□□□ 1.27
CBX4-203ENST00000494546 MRPS16Q9Y3D3 137 aaKnown RBP22.96■■□□□ 1.27
CBX4-203ENST00000494546 TRGV4A0A0C4DH28 118 aa22.95■■□□□ 1.26
CBX4-203ENST00000494546 IGHV3-16A0A0C4DH30 117 aa22.95■■□□□ 1.26
CBX4-203ENST00000494546 IGLV2-11P01706 119 aa22.95■■□□□ 1.26
CBX4-203ENST00000494546 SFTA3P0C7M3 94 aa22.95■■□□□ 1.26
CBX4-203ENST00000494546 KCNS1Q96KK3 526 aa22.95■■□□□ 1.26
CBX4-203ENST00000494546 UPK3BQ9BT76 320 aa22.95■■□□□ 1.26
CBX4-203ENST00000494546 ICOSQ9Y6W8 199 aa22.95■■□□□ 1.26
CBX4-203ENST00000494546 CRYBA4P53673 196 aa22.94■■□□□ 1.26
CBX4-203ENST00000494546 FGF8P55075 233 aaPredicted RBP22.94■■□□□ 1.26
CBX4-203ENST00000494546 UBE2G2P60604 165 aa22.94■■□□□ 1.26
CBX4-203ENST00000494546 C6orf223Q8N319 242 aa22.94■■□□□ 1.26
CBX4-203ENST00000494546 GCGP01275 180 aa22.93■■□□□ 1.26
CBX4-203ENST00000494546 ZNF80P51504 273 aaPredicted RBP22.93■■□□□ 1.26
CBX4-203ENST00000494546 ZNF479Q96JC4 524 aa22.93■■□□□ 1.26
CBX4-203ENST00000494546 TMEM75Q8N9X5 138 aa22.92■■□□□ 1.26
CBX4-203ENST00000494546 M0R2P5 195 aa22.91■■□□□ 1.26
CBX4-203ENST00000494546 IFNA7P01567 189 aa22.91■■□□□ 1.26
CBX4-203ENST00000494546 ZFP69Q49AA0 526 aa22.91■■□□□ 1.26
CBX4-203ENST00000494546 SMUG1Q53HV7 270 aa22.9■■□□□ 1.26
CBX4-203ENST00000494546 LINC00479Q96M42 142 aa22.9■■□□□ 1.26
CBX4-203ENST00000494546 TRAV34A0A0B4J273 112 aa22.89■■□□□ 1.25
CBX4-203ENST00000494546 FBLL1A6NHQ2 334 aaKnown RBP22.89■■□□□ 1.25
CBX4-203ENST00000494546 TTC32Q5I0X7 151 aa22.89■■□□□ 1.25
CBX4-203ENST00000494546 C11orf21Q9P2W6 132 aa22.89■■□□□ 1.25
CBX4-203ENST00000494546 MAP1LC3B2A6NCE7 125 aa22.88■■□□□ 1.25
CBX4-203ENST00000494546 PFN1P07737 140 aaKnown RBP22.88■■□□□ 1.25
CBX4-203ENST00000494546 SAPCD1Q5SSQ6 148 aa22.88■■□□□ 1.25
CBX4-203ENST00000494546 KCNRGQ8N5I3 272 aa22.88■■□□□ 1.25
CBX4-203ENST00000494546 MAP1LC3BQ9GZQ8 125 aa22.88■■□□□ 1.25
CBX4-203ENST00000494546 TRAV4A0A0B4J268 109 aa22.87■■□□□ 1.25
CBX4-203ENST00000494546 ZNF345Q14585 488 aa22.87■■□□□ 1.25
CBX4-203ENST00000494546 MRPL23Q16540 153 aaKnown RBP22.87■■□□□ 1.25
CBX4-203ENST00000494546 OR4C5Q8NGB2 326 aa22.87■■□□□ 1.25
CBX4-203ENST00000494546 KRTAP1-5Q9BYS1 174 aa22.87■■□□□ 1.25
CBX4-203ENST00000494546 FAM74A7A6NL05 159 aa22.86■■□□□ 1.25
CBX4-203ENST00000494546 OR11H4Q8NGC9 324 aa22.86■■□□□ 1.25
CBX4-203ENST00000494546 PEX7O00628 323 aa22.85■■□□□ 1.25
CBX4-203ENST00000494546 PPT1P50897 306 aa22.85■■□□□ 1.25
CBX4-203ENST00000494546 TNP2Q05952 138 aa22.85■■□□□ 1.25
CBX4-203ENST00000494546 NKX6-2Q9C056 277 aaPredicted RBP22.85■■□□□ 1.25
CBX4-203ENST00000494546 PCNPQ8WW12 178 aaKnown RBP22.84■■□□□ 1.25
CBX4-203ENST00000494546 ARL2-SNX15V9GYD0 113 aa22.84■■□□□ 1.25
CBX4-203ENST00000494546 HMSDA8MTL9 139 aa22.83■■□□□ 1.25
CBX4-203ENST00000494546 C9JCJ5 164 aa22.83■■□□□ 1.25
CBX4-203ENST00000494546 FHITP49789 147 aa22.83■■□□□ 1.25
CBX4-203ENST00000494546 NEGR1Q7Z3B1 354 aa22.82■■□□□ 1.24
CBX4-203ENST00000494546 STOML3Q8TAV4 291 aa22.82■■□□□ 1.24
CBX4-203ENST00000494546 A0A1W2PPQ1 181 aa22.81■■□□□ 1.24
CBX4-203ENST00000494546 K7EQD1 137 aa22.81■■□□□ 1.24
CBX4-203ENST00000494546 NXPH4O95158 308 aa22.81■■□□□ 1.24
CBX4-203ENST00000494546 GYPEP15421 78 aa22.81■■□□□ 1.24
CBX4-203ENST00000494546 SRIP30626 198 aa22.81■■□□□ 1.24
CBX4-203ENST00000494546 HIST1H2BAQ96A08 127 aa22.81■■□□□ 1.24
CBX4-203ENST00000494546 SIVA1O15304 175 aa22.8■■□□□ 1.24
CBX4-203ENST00000494546 ZNF876PQ49A33 203 aa22.8■■□□□ 1.24
CBX4-203ENST00000494546 LYPD5Q6UWN5 251 aa22.8■■□□□ 1.24
CBX4-203ENST00000494546 ZNF471Q9BX82 626 aaPredicted RBP22.8■■□□□ 1.24
CBX4-203ENST00000494546 A0A0D9SG52 128 aa22.79■■□□□ 1.24
CBX4-203ENST00000494546 KANTRA0A1W2PQU2 76 aa22.79■■□□□ 1.24
CBX4-203ENST00000494546 ORM1P02763 201 aa22.79■■□□□ 1.24
CBX4-203ENST00000494546 Q86TA4 180 aa22.79■■□□□ 1.24
CBX4-203ENST00000494546 BCL2L11O43521 198 aa22.78■■□□□ 1.24
CBX4-203ENST00000494546 SEC11BP0C7V7 166 aa22.78■■□□□ 1.24
CBX4-203ENST00000494546 CST9LP1Q5W188 147 aa22.77■■□□□ 1.24
CBX4-203ENST00000494546 C9orf85Q96MD7 179 aa22.77■■□□□ 1.24
CBX4-203ENST00000494546 PKD1P98161 4303 aa22.76■■□□□ 1.23
CBX4-203ENST00000494546 FAM213BQ8TBF2 198 aa22.76■■□□□ 1.23
CBX4-203ENST00000494546 FABP5P3A8MUU1 101 aa22.74■■□□□ 1.23
CBX4-203ENST00000494546 UMAD1C9J7I0 102 aa22.74■■□□□ 1.23
CBX4-203ENST00000494546 RNASE3P12724 160 aaKnown RBP22.74■■□□□ 1.23
CBX4-203ENST00000494546 SFT2D1Q8WV19 159 aa22.74■■□□□ 1.23
CBX4-203ENST00000494546 TXNDC17Q9BRA2 123 aa22.74■■□□□ 1.23
CBX4-203ENST00000494546 PKHD1P08F94 4074 aa22.73■■□□□ 1.23
CBX4-203ENST00000494546 IGKV3D-20A0A0C4DH25 116 aa22.73■■□□□ 1.23
CBX4-203ENST00000494546 LOC100131303A0A0U1RQF7 123 aa22.73■■□□□ 1.23
CBX4-203ENST00000494546 GATA1P15976 413 aaPredicted RBP22.73■■□□□ 1.23
CBX4-203ENST00000494546 UBE2G1P62253 170 aa22.73■■□□□ 1.23
CBX4-203ENST00000494546 DPPA3Q6W0C5 159 aa22.73■■□□□ 1.23
CBX4-203ENST00000494546 ZNF575Q86XF7 245 aa22.73■■□□□ 1.23
CBX4-203ENST00000494546 A0A1B0GV50 99 aa22.72■■□□□ 1.23
CBX4-203ENST00000494546 PGPEP1LA6NFU8 196 aa22.72■■□□□ 1.23
CBX4-203ENST00000494546 ZNF506Q5JVG8 444 aa22.72■■□□□ 1.23
CBX4-203ENST00000494546 CFAP126Q5VTH2 177 aa22.72■■□□□ 1.23
CBX4-203ENST00000494546 FMC1Q96HJ9 113 aa22.72■■□□□ 1.23
CBX4-203ENST00000494546 RS1O15537 224 aa22.71■■□□□ 1.23
CBX4-203ENST00000494546 PAGE4O60829 102 aa22.71■■□□□ 1.23
CBX4-203ENST00000494546 PFDN1O60925 122 aa22.71■■□□□ 1.23
CBX4-203ENST00000494546 S100A4P26447 101 aaKnown RBP22.71■■□□□ 1.23
CBX4-203ENST00000494546 ZC2HC1AQ96GY0 325 aa22.71■■□□□ 1.23
CBX4-203ENST00000494546 IGHV3-73A0A0B4J1V6 119 aa22.7■■□□□ 1.22
CBX4-203ENST00000494546 MED14OSP0DP75 135 aa22.7■■□□□ 1.22
CBX4-203ENST00000494546 EIF5AP63241 154 aaKnown RBP22.7■■□□□ 1.22
CBX4-203ENST00000494546 TMUB2Q71RG4 321 aa22.7■■□□□ 1.22
CBX4-203ENST00000494546 MBD3L1Q8WWY6 194 aa22.7■■□□□ 1.22
CBX4-203ENST00000494546 TCEAL7Q9BRU2 100 aa22.7■■□□□ 1.22
CBX4-203ENST00000494546 ZFP30Q9Y2G7 519 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms