RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 GCGP01275 180 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 AKR1C3P42330 323 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 RAB5CP51148 216 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 TCL1AP56279 114 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 Q6ZQT7 251 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 HIST1H2BAQ96A08 127 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 FAM210BQ96KR6 192 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 C8orf49Q96NF6 230 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 ARL2-SNX15V9GYD0 113 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 DAZ2Q13117 558 aaKnown RBP10.35□□□□□ -0.75
SS18L1-205ENST00000492466 OR5I1Q13606 314 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 SAPCD1Q5SSQ6 148 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 Q6ZTI0 123 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 Q86TA4 180 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
SS18L1-205ENST00000492466 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 A0A1B0GVG6 124 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 RTL8CO15255 209 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 P0DMU3 169 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 FAM231AP0DMU4 169 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 FAM231CP0DMU5 169 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 C9orf62Q8N4C0 152 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 MBD3L1Q8WWY6 194 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 FMC1Q96HJ9 113 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 KCNS1Q96KK3 526 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 TCEAL7Q9BRU2 100 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 GNG13Q9P2W3 67 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 NUDT3O95989 172 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 IFNA1P01562 189 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 LINC00479Q96M42 142 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 MANBALQ9NQG1 85 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
SS18L1-205ENST00000492466 SULT1A2P50226 295 aa10.32□□□□□ -0.76
SS18L1-205ENST00000492466 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 SPXQ9BT56 116 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 HSPG2P98160 4391 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 A0A0J9YY99 117 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 SCO2A0A1W2PP80 73 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 M0R2N4 97 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 SPINK4O60575 86 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 TYMSP04818 313 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 NKX2-5P52952 324 aaPredicted RBP10.3□□□□□ -0.76
SS18L1-205ENST00000492466 LGALS9BQ3B8N2 356 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 GNRH2O43555 120 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
SS18L1-205ENST00000492466 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
SS18L1-205ENST00000492466 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 Q6ZR54 194 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 ZFP30Q9Y2G7 519 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 IGHV3-16A0A0C4DH30 117 aa10.28□□□□□ -0.76
SS18L1-205ENST00000492466 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
SS18L1-205ENST00000492466 ORM1P02763 201 aa10.28□□□□□ -0.76
SS18L1-205ENST00000492466 S100A9P06702 114 aaKnown RBP10.28□□□□□ -0.76
SS18L1-205ENST00000492466 NACAE9PAV3 2078 aa10.27□□□□□ -0.76
SS18L1-205ENST00000492466 TRAV1-1A0A0B4J248 108 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 TRGV4A0A0C4DH28 118 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 M0R2P5 195 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 HOXA5P20719 270 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 NHLRC2Q8NBF2 726 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 ZC2HC1AQ96GY0 325 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 MUC4Q99102 2169 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 B4DEV8 164 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 C9JCJ5 164 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 M0R036 132 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 SH2D1AO60880 128 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 MED14OSP0DP75 135 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 ASIPP42127 132 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 LTAP01374 205 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 CCL18P55774 89 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 BLOC1S1P78537 153 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 CCL20P78556 96 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 OR4C5Q8NGB2 326 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 PCNPQ8WW12 178 aaKnown RBP10.25□□□□□ -0.77
SS18L1-205ENST00000492466 C18orf15Q96N68 181 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 TXNDC17Q9BRA2 123 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 TRBV6-1A0A0K0K1D8 114 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 PAX4O43316 350 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 SFTA3P0C7M3 94 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 BCL2P10415 239 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 MEF2BQ02080 365 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms