RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	IGHV4-30-2	A0A087WSY4	118 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833		A0A087WW49	117 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	TMSB15B	A0A087X1C1	80 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	TMEM213	A2RRL7	107 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.83	□□□□□ -1.64
FN1-223	ENST00000490833	TGFA	P01135	160 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	ZNF25	P17030	456 aa	Predicted RBP	4.83	□□□□□ -1.64
FN1-223	ENST00000490833	EVI2A	P22794	236 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	TAL2	Q16559	108 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	BRD3OS	Q6XYD6	125 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833		Q6YL49	198 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	WFDC3	Q8IUB2	231 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	FAM19A4	Q96LR4	140 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	HIGD1B	Q9P298	99 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	VPREB3	Q9UKI3	123 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	SETX	Q7Z333	2677 aa	Known RBP	4.83	□□□□□ -1.64
FN1-223	ENST00000490833	IGKV3D-20	A0A0C4DH25	116 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	LOC389332	A0A1B0GUA5	103 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833		A1L4Q6	167 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833		H7C1H1	209 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	SOCS3	O14543	225 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	VCY	O14598	125 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	DPM2	O94777	84 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	IGKC	P01834	107 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	LGALS1	P09382	135 aa	Known RBP	4.82	□□□□□ -1.64
FN1-223	ENST00000490833	NPS	P0C0P6	89 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	IGHV4-38-2	P0DP08	117 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	ZNF80	P51504	273 aa	Predicted RBP	4.82	□□□□□ -1.64
FN1-223	ENST00000490833	ERCC8	Q13216	396 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	BATF	Q16520	125 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	GTF2H5	Q6ZYL4	71 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	POM121L12	Q8N7R1	296 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833		Q8TAT8	98 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	RNF185	Q96GF1	192 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	KIR2DL4	Q99706	377 aa		4.82	□□□□□ -1.64
FN1-223	ENST00000490833	FASN	P49327	2511 aa	Known RBP	4.82	□□□□□ -1.64
FN1-223	ENST00000490833	SPTBN1	Q01082	2364 aa	Known RBP	4.81	□□□□□ -1.64
FN1-223	ENST00000490833	TRGV11	A0A075B6L2	103 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	IGHV3-35	A0A0C4DH35	117 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	LINC01548	A6NM66	108 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	KLLN	B2CW77	178 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	NXPH4	O95158	308 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	NUDT3	O95989	172 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	NPY	P01303	97 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	SUMO2	P61956	95 aa	Known RBP	4.81	□□□□□ -1.64
FN1-223	ENST00000490833	HSD52	Q0P140	79 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	SMAGP	Q0VAQ4	97 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	UBE2V1	Q13404	147 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	LY6E	Q16553	131 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	FOXI2	Q6ZQN5	318 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833		Q8N2B8	174 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	RNF182	Q8N6D2	247 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	ZFAND2A	Q8N6M9	145 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	PTH2	Q96A98	100 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	TMEM141	Q96I45	108 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	CLUHP3	Q96NS8	147 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	TMEM208	Q9BTX3	173 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	ZMAT4	Q9H898	229 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	COX11	Q9Y6N1	276 aa		4.81	□□□□□ -1.64
FN1-223	ENST00000490833	WNK2	Q9Y3S1	2297 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833		A0A087WX48	190 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	TRAV25	A0A0B4J276	109 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	PRAC2	D3DTV9	90 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	SMAD7	O15105	426 aa	Known RBP	4.8	□□□□□ -1.64
FN1-223	ENST00000490833	RNASE4	P34096	147 aa	Known RBP	4.8	□□□□□ -1.64
FN1-223	ENST00000490833	CDKN1B	P46527	198 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	CRYBA4	P53673	196 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	PTTG1IP	P53801	180 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	HERVK_113	P61574	105 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	BLCAP	P62952	87 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	DEFB113	Q30KQ7	82 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	ATOH7	Q8N100	152 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	SMIM2	Q9BVW6	85 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	ASPM	Q8IZT6	3477 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	HIVEP3	Q5T1R4	2406 aa		4.8	□□□□□ -1.64
FN1-223	ENST00000490833	IGHV3-66	A0A0C4DH42	116 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	TRBV6-5	A0A0K0K1A5	114 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	TMEM238L	A0A1B0GVL6	79 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	LINC01619	G3V211	115 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833		H3BRM9	83 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	ZNF207	O43670	478 aa	Known RBP	4.79	□□□□□ -1.64
FN1-223	ENST00000490833	CIDEA	O60543	219 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	FSHB	P01225	129 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	HLA-DMB	P28068	263 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	HINT1	P49773	126 aa	Predicted RBP	4.79	□□□□□ -1.64
FN1-223	ENST00000490833	DEFB112	Q30KQ8	113 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	BVES-AS1	Q5T3Y7	98 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	UNQ9165/PRO28630	Q6UXU0	137 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	DCANP1	Q8TF63	244 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	TOMM6	Q96B49	74 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	SCGB3A1	Q96QR1	104 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	KRTAP9-3	Q9BYQ3	159 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	EDA2R	Q9HAV5	297 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	CYSLTR1	Q9Y271	337 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	CBY1	Q9Y3M2	126 aa		4.79	□□□□□ -1.64
FN1-223	ENST00000490833	BOD1L1	Q8NFC6	3051 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	NBEA	Q8NFP9	2946 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	COL6A6	A6NMZ7	2263 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	IGLV2-18	A0A075B6J9	118 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	IGHV3OR16-10	A0A075B7F0	116 aa		4.78	□□□□□ -1.64

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