RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101		J3KRW8	73 aa		13.27	□□□□□ -0.29
SRM-206	ENST00000490101	BTN1A1	Q13410	526 aa		13.27	□□□□□ -0.29
SRM-206	ENST00000490101	CT83	Q5H943	113 aa		13.27	□□□□□ -0.29
SRM-206	ENST00000490101	GFI1B	Q5VTD9	330 aa		13.27	□□□□□ -0.29
SRM-206	ENST00000490101	RPP21	Q9H633	154 aa	Known RBP	13.27	□□□□□ -0.29
SRM-206	ENST00000490101	EDA2R	Q9HAV5	297 aa		13.27	□□□□□ -0.29
SRM-206	ENST00000490101	LCE6A	A0A183	80 aa		13.26	□□□□□ -0.29
SRM-206	ENST00000490101	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.26	□□□□□ -0.29
SRM-206	ENST00000490101	CRX	O43186	299 aa	Predicted RBP	13.26	□□□□□ -0.29
SRM-206	ENST00000490101	NUTF2	P61970	127 aa	Known RBP	13.26	□□□□□ -0.29
SRM-206	ENST00000490101	EPPK1	P58107	5090 aa	Known RBP	13.26	□□□□□ -0.29
SRM-206	ENST00000490101	CXorf65	A6NEN9	183 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	ZNF324	O75467	553 aa	Predicted RBP	13.25	□□□□□ -0.29
SRM-206	ENST00000490101	SCO1	O75880	301 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	FXYD7	P58549	80 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	LINC01559	Q495D7	138 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	MORN3	Q6PF18	240 aa	Predicted RBP	13.25	□□□□□ -0.29
SRM-206	ENST00000490101	OR2D3	Q8NGH3	330 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	SRD5A3	Q9H8P0	318 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	SMCO4	Q9NRQ5	59 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	C11orf21	Q9P2W6	132 aa		13.25	□□□□□ -0.29
SRM-206	ENST00000490101	TRAV12-2	A0A075B6T6	113 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101	TRAV12-3	A0A0B4J271	114 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101	TMEM189	A5PLL7	270 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101		A8MWL6	223 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101		Q6ZQT7	251 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101	IMMP2L	Q96T52	175 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101	RETN	Q9HD89	108 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101	IL36B	Q9NZH7	164 aa		13.24	□□□□□ -0.29
SRM-206	ENST00000490101	ORM1	P02763	201 aa		13.23	□□□□□ -0.29
SRM-206	ENST00000490101	RPL35A	P18077	110 aa	Known RBP	13.23	□□□□□ -0.29
SRM-206	ENST00000490101	RPS20	P60866	119 aa	Known RBP	13.23	□□□□□ -0.29
SRM-206	ENST00000490101	C20orf144	Q9BQM9	153 aa		13.23	□□□□□ -0.29
SRM-206	ENST00000490101	GIG44	P09565	113 aa	Predicted RBP	13.22	□□□□□ -0.29
SRM-206	ENST00000490101	RPL19	P84098	196 aa	Known RBP	13.22	□□□□□ -0.29
SRM-206	ENST00000490101	ZNF575	Q86XF7	245 aa		13.22	□□□□□ -0.29
SRM-206	ENST00000490101	CBLN2	Q8IUK8	224 aa		13.22	□□□□□ -0.29
SRM-206	ENST00000490101	TSKU	Q8WUA8	353 aa		13.22	□□□□□ -0.29
SRM-206	ENST00000490101	IGKV3D-20	A0A0C4DH25	116 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	SMIM27	A0A1W2PRY6	76 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	XKRY2	A2RUG3	117 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	FAM231B	A6NCW3	169 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	CA1	P00915	261 aa	Predicted RBP	13.21	□□□□□ -0.29
SRM-206	ENST00000490101	INS	P01308	110 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	CXCL1	P09341	107 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	TMEM88	Q6PEY1	159 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	C1QTNF4	Q9BXJ3	329 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	GFRA4	Q9GZZ7	299 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	XCL2	Q9UBD3	114 aa		13.21	□□□□□ -0.29
SRM-206	ENST00000490101	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.2	□□□□□ -0.3
SRM-206	ENST00000490101	KIR2DL5B	A0A0G2JN68	375 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	KIR2DL5B	A0A0G2JPC4	375 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	RBMY1A1	P0DJD3	496 aa	Known RBP	13.2	□□□□□ -0.3
SRM-206	ENST00000490101	RBMY1C	P0DJD4	496 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	RBMY1F	Q15415	496 aa	Known RBP	13.2	□□□□□ -0.3
SRM-206	ENST00000490101	TDRG1	Q3Y452	100 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	KIR2DL5A	Q8N109	375 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	KIR2DL5B	Q8NHK3	375 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	KCNS1	Q96KK3	526 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	CSTL1	Q9H114	145 aa		13.2	□□□□□ -0.3
SRM-206	ENST00000490101	TMSB15B	A0A087X1C1	80 aa		13.19	□□□□□ -0.3
SRM-206	ENST00000490101	S100P	P25815	95 aa		13.19	□□□□□ -0.3
SRM-206	ENST00000490101	FOXA3	P55318	350 aa	Predicted RBP	13.19	□□□□□ -0.3
SRM-206	ENST00000490101	ANXA2R	Q3ZCQ2	193 aa		13.19	□□□□□ -0.3
SRM-206	ENST00000490101	KCNIP4	Q6PIL6	250 aa		13.19	□□□□□ -0.3
SRM-206	ENST00000490101	FAM159A	Q6UWV7	190 aa		13.19	□□□□□ -0.3
SRM-206	ENST00000490101	YPEL4	Q96NS1	127 aa		13.19	□□□□□ -0.3
SRM-206	ENST00000490101	LINC00467	Q9BRT7	94 aa		13.19	□□□□□ -0.3
SRM-206	ENST00000490101	PLEC	Q15149	4684 aa	Known RBP	13.19	□□□□□ -0.3
SRM-206	ENST00000490101	IGHV1OR15-1	A0A075B7D0	117 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	GZMB	P10144	247 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	MUC21	Q5SSG8	566 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	DNLZ	Q5SXM8	178 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	TMEM256	Q8N2U0	113 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	GTSF1	Q8WW33	167 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	NEU1	Q99519	415 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	NAGK	Q9UJ70	344 aa		13.18	□□□□□ -0.3
SRM-206	ENST00000490101	HYDIN	Q4G0P3	5121 aa		13.17	□□□□□ -0.3
SRM-206	ENST00000490101	TRAV9-1	A0A075B6T8	112 aa		13.17	□□□□□ -0.3
SRM-206	ENST00000490101	C1orf158	Q8N1D5	194 aa		13.17	□□□□□ -0.3
SRM-206	ENST00000490101	CSNK1G2-AS1	Q8NCQ2	148 aa		13.17	□□□□□ -0.3
SRM-206	ENST00000490101	PYGO2	Q9BRQ0	406 aa		13.17	□□□□□ -0.3
SRM-206	ENST00000490101	URGCP-MRPS24	S4R325	110 aa		13.17	□□□□□ -0.3
SRM-206	ENST00000490101	BIRC6	Q9NR09	4857 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101		A0A1W2PPQ1	181 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101	GRIFIN	A4D1Z8	144 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101	IGLC6	P0CF74	106 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101	APOC4	P55056	127 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101	TCL1A	P56279	114 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101	FAM3B	P58499	235 aa	Predicted RBP	13.16	□□□□□ -0.3
SRM-206	ENST00000490101	ELOB	Q15370	118 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101	NAT8B	Q9UHF3	227 aa		13.16	□□□□□ -0.3
SRM-206	ENST00000490101	TRBV24-1	A0A075B6N3	115 aa		13.15	□□□□□ -0.3
SRM-206	ENST00000490101	HIGD1C	A8MV81	97 aa		13.15	□□□□□ -0.3
SRM-206	ENST00000490101	NUP35	Q8NFH5	326 aa		13.15	□□□□□ -0.3
SRM-206	ENST00000490101	GOLT1B	Q9Y3E0	138 aa		13.15	□□□□□ -0.3
SRM-206	ENST00000490101	ALMS1	Q8TCU4	4167 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	UBE2C	O00762	179 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	GNRH2	O43555	120 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	TYMS	P04818	313 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms