RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TAAR5O14804 337 aa17.24■□□□□ 0.35
HMGN1-217ENST00000489072 TYMSP04818 313 aa17.24■□□□□ 0.35
HMGN1-217ENST00000489072 SFTA3P0C7M3 94 aa17.24■□□□□ 0.35
HMGN1-217ENST00000489072 ZNF80P51504 273 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-217ENST00000489072 CRYBA4P53673 196 aa17.24■□□□□ 0.35
HMGN1-217ENST00000489072 NDFIP1Q9BT67 221 aa17.24■□□□□ 0.35
HMGN1-217ENST00000489072 KRTAP1-5Q9BYS1 174 aa17.24■□□□□ 0.35
HMGN1-217ENST00000489072 PRO0255Q9UI72 69 aa17.24■□□□□ 0.35
HMGN1-217ENST00000489072 A0A1W2PRE2 83 aa17.23■□□□□ 0.35
HMGN1-217ENST00000489072 C6orf223Q8N319 242 aa17.23■□□□□ 0.35
HMGN1-217ENST00000489072 CYB561D1Q8N8Q1 229 aa17.23■□□□□ 0.35
HMGN1-217ENST00000489072 ZNF479Q96JC4 524 aa17.23■□□□□ 0.35
HMGN1-217ENST00000489072 C11orf21Q9P2W6 132 aa17.23■□□□□ 0.35
HMGN1-217ENST00000489072 HHLA3Q9XRX5 114 aa17.23■□□□□ 0.35
HMGN1-217ENST00000489072 K7EQM0 130 aa17.22■□□□□ 0.35
HMGN1-217ENST00000489072 FGF8P55075 233 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-217ENST00000489072 FLI1Q01543 452 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-217ENST00000489072 AKR1C8PQ5T2L2 129 aa17.22■□□□□ 0.35
HMGN1-217ENST00000489072 ICOSQ9Y6W8 199 aa17.22■□□□□ 0.35
HMGN1-217ENST00000489072 SLAQ13239 276 aa17.21■□□□□ 0.35
HMGN1-217ENST00000489072 PRNTQ86SH4 94 aa17.21■□□□□ 0.35
HMGN1-217ENST00000489072 TMEM75Q8N9X5 138 aa17.21■□□□□ 0.35
HMGN1-217ENST00000489072 SDF2L1Q9HCN8 221 aa17.21■□□□□ 0.35
HMGN1-217ENST00000489072 GCGP01275 180 aa17.2■□□□□ 0.34
HMGN1-217ENST00000489072 UBE2G2P60604 165 aa17.2■□□□□ 0.34
HMGN1-217ENST00000489072 KCNS1Q96KK3 526 aa17.2■□□□□ 0.34
HMGN1-217ENST00000489072 LINC00479Q96M42 142 aa17.2■□□□□ 0.34
HMGN1-217ENST00000489072 TRGV4A0A0C4DH28 118 aa17.19■□□□□ 0.34
HMGN1-217ENST00000489072 M0R2P5 195 aa17.19■□□□□ 0.34
HMGN1-217ENST00000489072 TNP2Q05952 138 aa17.19■□□□□ 0.34
HMGN1-217ENST00000489072 OR11H4Q8NGC9 324 aa17.19■□□□□ 0.34
HMGN1-217ENST00000489072 TRAV34A0A0B4J273 112 aa17.18■□□□□ 0.34
HMGN1-217ENST00000489072 KCNRGQ8N5I3 272 aa17.18■□□□□ 0.34
HMGN1-217ENST00000489072 TRAV4A0A0B4J268 109 aa17.17■□□□□ 0.34
HMGN1-217ENST00000489072 PFN1P07737 140 aaKnown RBP17.17■□□□□ 0.34
HMGN1-217ENST00000489072 SMUG1Q53HV7 270 aa17.17■□□□□ 0.34
HMGN1-217ENST00000489072 MAP1LC3B2A6NCE7 125 aa17.16■□□□□ 0.34
HMGN1-217ENST00000489072 FBLL1A6NHQ2 334 aaKnown RBP17.16■□□□□ 0.34
HMGN1-217ENST00000489072 FAM74A7A6NL05 159 aa17.16■□□□□ 0.34
HMGN1-217ENST00000489072 IFNA7P01567 189 aa17.16■□□□□ 0.34
HMGN1-217ENST00000489072 ZNF345Q14585 488 aa17.16■□□□□ 0.34
HMGN1-217ENST00000489072 TTC32Q5I0X7 151 aa17.16■□□□□ 0.34
HMGN1-217ENST00000489072 MAP1LC3BQ9GZQ8 125 aa17.16■□□□□ 0.34
HMGN1-217ENST00000489072 MRPL23Q16540 153 aaKnown RBP17.15■□□□□ 0.34
HMGN1-217ENST00000489072 ZFP69Q49AA0 526 aa17.15■□□□□ 0.34
HMGN1-217ENST00000489072 OR4C5Q8NGB2 326 aa17.15■□□□□ 0.34
HMGN1-217ENST00000489072 PEX7O00628 323 aa17.14■□□□□ 0.33
HMGN1-217ENST00000489072 FHITP49789 147 aa17.14■□□□□ 0.33
HMGN1-217ENST00000489072 SAPCD1Q5SSQ6 148 aa17.14■□□□□ 0.33
HMGN1-217ENST00000489072 ARL2-SNX15V9GYD0 113 aa17.14■□□□□ 0.33
HMGN1-217ENST00000489072 A0A1W2PPQ1 181 aa17.13■□□□□ 0.33
HMGN1-217ENST00000489072 HMSDA8MTL9 139 aa17.13■□□□□ 0.33
HMGN1-217ENST00000489072 K7EQD1 137 aa17.13■□□□□ 0.33
HMGN1-217ENST00000489072 NXPH4O95158 308 aa17.13■□□□□ 0.33
HMGN1-217ENST00000489072 LYPD5Q6UWN5 251 aa17.13■□□□□ 0.33
HMGN1-217ENST00000489072 GYPEP15421 78 aa17.12■□□□□ 0.33
HMGN1-217ENST00000489072 Q86TA4 180 aa17.12■□□□□ 0.33
HMGN1-217ENST00000489072 C9orf85Q96MD7 179 aa17.12■□□□□ 0.33
HMGN1-217ENST00000489072 NKX6-2Q9C056 277 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-217ENST00000489072 C9JCJ5 164 aa17.11■□□□□ 0.33
HMGN1-217ENST00000489072 SIVA1O15304 175 aa17.11■□□□□ 0.33
HMGN1-217ENST00000489072 DPPA3Q6W0C5 159 aa17.11■□□□□ 0.33
HMGN1-217ENST00000489072 NEGR1Q7Z3B1 354 aa17.11■□□□□ 0.33
HMGN1-217ENST00000489072 ZNF575Q86XF7 245 aa17.11■□□□□ 0.33
HMGN1-217ENST00000489072 PPT1P50897 306 aa17.1■□□□□ 0.33
HMGN1-217ENST00000489072 ZNF876PQ49A33 203 aa17.1■□□□□ 0.33
HMGN1-217ENST00000489072 HIST1H2BAQ96A08 127 aa17.1■□□□□ 0.33
HMGN1-217ENST00000489072 LOC100131303A0A0U1RQF7 123 aa17.09■□□□□ 0.33
HMGN1-217ENST00000489072 ORM1P02763 201 aa17.09■□□□□ 0.33
HMGN1-217ENST00000489072 SEC11BP0C7V7 166 aa17.09■□□□□ 0.33
HMGN1-217ENST00000489072 RNASE3P12724 160 aaKnown RBP17.09■□□□□ 0.33
HMGN1-217ENST00000489072 GATA1P15976 413 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-217ENST00000489072 SRIP30626 198 aa17.09■□□□□ 0.33
HMGN1-217ENST00000489072 PCNPQ8WW12 178 aaKnown RBP17.09■□□□□ 0.33
HMGN1-217ENST00000489072 IGKV3D-20A0A0C4DH25 116 aa17.08■□□□□ 0.32
HMGN1-217ENST00000489072 A0A0D9SG52 128 aa17.08■□□□□ 0.32
HMGN1-217ENST00000489072 BCL2L11O43521 198 aa17.08■□□□□ 0.32
HMGN1-217ENST00000489072 ZNF471Q9BX82 626 aaPredicted RBP17.08■□□□□ 0.32
HMGN1-217ENST00000489072 PGPEP1LA6NFU8 196 aa17.07■□□□□ 0.32
HMGN1-217ENST00000489072 RS1O15537 224 aa17.07■□□□□ 0.32
HMGN1-217ENST00000489072 CFAP126Q5VTH2 177 aa17.07■□□□□ 0.32
HMGN1-217ENST00000489072 STOML3Q8TAV4 291 aa17.07■□□□□ 0.32
HMGN1-217ENST00000489072 FABP5P3A8MUU1 101 aa17.06■□□□□ 0.32
HMGN1-217ENST00000489072 MED14OSP0DP75 135 aa17.06■□□□□ 0.32
HMGN1-217ENST00000489072 ZNF506Q5JVG8 444 aa17.06■□□□□ 0.32
HMGN1-217ENST00000489072 FAM213BQ8TBF2 198 aa17.06■□□□□ 0.32
HMGN1-217ENST00000489072 PTH2Q96A98 100 aa17.06■□□□□ 0.32
HMGN1-217ENST00000489072 ZC2HC1AQ96GY0 325 aa17.06■□□□□ 0.32
HMGN1-217ENST00000489072 KANTRA0A1W2PQU2 76 aa17.05■□□□□ 0.32
HMGN1-217ENST00000489072 CRIP1P50238 77 aa17.05■□□□□ 0.32
HMGN1-217ENST00000489072 LINC00315P59091 139 aa17.05■□□□□ 0.32
HMGN1-217ENST00000489072 CST9LP1Q5W188 147 aa17.05■□□□□ 0.32
HMGN1-217ENST00000489072 MBD3L1Q8WWY6 194 aa17.05■□□□□ 0.32
HMGN1-217ENST00000489072 UMAD1C9J7I0 102 aa17.04■□□□□ 0.32
HMGN1-217ENST00000489072 BTF3P20290 206 aaKnown RBP17.04■□□□□ 0.32
HMGN1-217ENST00000489072 COX8CQ7Z4L0 72 aa17.04■□□□□ 0.32
HMGN1-217ENST00000489072 SFT2D1Q8WV19 159 aa17.04■□□□□ 0.32
HMGN1-217ENST00000489072 FMC1Q96HJ9 113 aa17.04■□□□□ 0.32
HMGN1-217ENST00000489072 TXNDC17Q9BRA2 123 aa17.04■□□□□ 0.32
HMGN1-217ENST00000489072 RYR1P21817 5038 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms