RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
EPHB4-206ENST00000487222 MORN5Q5VZ52 161 aa11.58□□□□□ -0.56
EPHB4-206ENST00000487222 UBE2DNLQ8IWF7 75 aa11.58□□□□□ -0.56
EPHB4-206ENST00000487222 PRSS33Q8NF86 280 aa11.58□□□□□ -0.56
EPHB4-206ENST00000487222 J3QLI3 93 aa11.58□□□□□ -0.56
EPHB4-206ENST00000487222 LHBP01229 141 aa11.58□□□□□ -0.56
EPHB4-206ENST00000487222 ATP6V0BQ99437 205 aa11.58□□□□□ -0.56
EPHB4-206ENST00000487222 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
EPHB4-206ENST00000487222 ELANEP08246 267 aa11.57□□□□□ -0.56
EPHB4-206ENST00000487222 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
EPHB4-206ENST00000487222 CFHR3Q02985 330 aa11.57□□□□□ -0.56
EPHB4-206ENST00000487222 H3BMG7 143 aa11.57□□□□□ -0.56
EPHB4-206ENST00000487222 BOD1L2Q8IYS8 172 aa11.57□□□□□ -0.56
EPHB4-206ENST00000487222 IGFL2Q6UWQ7 119 aa11.57□□□□□ -0.56
EPHB4-206ENST00000487222 K7ERJ3 54 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 WT1P19544 449 aaPredicted RBP11.56□□□□□ -0.56
EPHB4-206ENST00000487222 GAGE7O76087 117 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 GAGE12FP0CL80 117 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 GAGE12GP0CL81 117 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 GAGE12IP0CL82 117 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 C12orf74Q32Q52 190 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 UTF1Q5T230 341 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 SPG11Q96JI7 2443 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 HERVK_113P63121 156 aa11.56□□□□□ -0.56
EPHB4-206ENST00000487222 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 MAPK1IP1LQ8NDC0 245 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 SPANXDQ9BXN6 97 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 MED13Q9UHV7 2174 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 SHISA9B4DS77 424 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 GP9P14770 177 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 DAD1P61803 113 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 GAGE12HA6NDE8 117 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 RHOHQ15669 191 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 CFHR4Q92496 578 aa11.55□□□□□ -0.56
EPHB4-206ENST00000487222 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
EPHB4-206ENST00000487222 DEFB125Q8N687 156 aa11.54□□□□□ -0.56
EPHB4-206ENST00000487222 F5H768 121 aa11.54□□□□□ -0.56
EPHB4-206ENST00000487222 GAGE6Q13070 117 aa11.54□□□□□ -0.56
EPHB4-206ENST00000487222 FOXE3Q13461 319 aa11.54□□□□□ -0.56
EPHB4-206ENST00000487222 CR1LQ2VPA4 569 aa11.54□□□□□ -0.56
EPHB4-206ENST00000487222 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
EPHB4-206ENST00000487222 PSCAO43653 123 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 NOTCH2Q04721 2471 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 DENND4CQ5VZ89 1909 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 IGF2-ASQ6U949 168 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 TRAV13-2A0A0B4J235 113 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 I3L2K1 104 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 IGKV1-17P01599 117 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 FOXI2Q6ZQN5 318 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 GNRH2O43555 120 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 PATE2Q6UY27 113 aa11.53□□□□□ -0.56
EPHB4-206ENST00000487222 NUPR1O60356 82 aa11.52□□□□□ -0.56
EPHB4-206ENST00000487222 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.56
EPHB4-206ENST00000487222 CARD19Q96LW7 228 aa11.52□□□□□ -0.56
EPHB4-206ENST00000487222 UBL5Q9BZL1 73 aa11.52□□□□□ -0.56
EPHB4-206ENST00000487222 F6UB75 175 aa11.52□□□□□ -0.57
EPHB4-206ENST00000487222 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
EPHB4-206ENST00000487222 K7EIM0 57 aa11.52□□□□□ -0.57
EPHB4-206ENST00000487222 Q96MF0 132 aa11.52□□□□□ -0.57
EPHB4-206ENST00000487222 EML6Q6ZMW3 1958 aa11.52□□□□□ -0.57
EPHB4-206ENST00000487222 SPRNQ5BIV9 151 aa11.52□□□□□ -0.57
EPHB4-206ENST00000487222 NXPH4O95158 308 aa11.51□□□□□ -0.57
EPHB4-206ENST00000487222 DEFB121Q5J5C9 76 aa11.51□□□□□ -0.57
EPHB4-206ENST00000487222 IGF2BP2-AS1Q96M15 143 aa11.51□□□□□ -0.57
EPHB4-206ENST00000487222 NPBQ8NG41 125 aa11.51□□□□□ -0.57
EPHB4-206ENST00000487222 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
EPHB4-206ENST00000487222 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
EPHB4-206ENST00000487222 CFC1P0CG37 223 aa11.5□□□□□ -0.57
EPHB4-206ENST00000487222 LINC01545Q5VT33 79 aa11.5□□□□□ -0.57
EPHB4-206ENST00000487222 CCL25O15444 150 aa11.5□□□□□ -0.57
EPHB4-206ENST00000487222 GATA1P15976 413 aaPredicted RBP11.5□□□□□ -0.57
EPHB4-206ENST00000487222 DKK4Q9UBT3 224 aa11.5□□□□□ -0.57
EPHB4-206ENST00000487222 IGLV11-55A0A075B6I3 123 aa11.49□□□□□ -0.57
EPHB4-206ENST00000487222 FAM167A-AS1Q96KT0 104 aa11.49□□□□□ -0.57
EPHB4-206ENST00000487222 IFITM1P13164 125 aa11.49□□□□□ -0.57
EPHB4-206ENST00000487222 IGHV7-81A0A0B4J1V7 117 aa11.49□□□□□ -0.57
EPHB4-206ENST00000487222 Q6ZVH6 145 aa11.49□□□□□ -0.57
EPHB4-206ENST00000487222 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
EPHB4-206ENST00000487222 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
EPHB4-206ENST00000487222 PLCE1Q9P212 2302 aa11.48□□□□□ -0.57
EPHB4-206ENST00000487222 RNASE13Q5GAN3 156 aaKnown RBP11.48□□□□□ -0.57
EPHB4-206ENST00000487222 TECTAO75443 2155 aa11.48□□□□□ -0.57
EPHB4-206ENST00000487222 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
EPHB4-206ENST00000487222 SCRT2Q9NQ03 307 aa11.48□□□□□ -0.57
EPHB4-206ENST00000487222 ATRXP46100 2492 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 ANKHD1Q8IWZ3 2542 aaKnown RBP11.47□□□□□ -0.57
EPHB4-206ENST00000487222 CTSGP08311 255 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 CUL9Q8IWT3 2517 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 ANKRD39Q53RE8 183 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 LINC00173Q6ZV60 143 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 NKAPP1Q8N9T2 125 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 CRLF1O75462 422 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 APOC4P55056 127 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 HAMPP81172 84 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 TDRG1Q3Y452 100 aa11.47□□□□□ -0.57
EPHB4-206ENST00000487222 HOXD3P31249 432 aaPredicted RBP11.46□□□□□ -0.57
EPHB4-206ENST00000487222 IGFBPL1Q8WX77 278 aa11.46□□□□□ -0.58
EPHB4-206ENST00000487222 C3orf56Q8N813 242 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms