RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SMPXQ9UHP9 88 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 LENEPQ9Y5L5 61 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 IGHV3OR16-8A0A075B7F1 116 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 A0A1B0GW15 77 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 A8MWP6 167 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 M0R3E3 92 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 FOXA3P55318 350 aaPredicted RBP6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 NDUFA6P56556 154 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 FABP9Q0Z7S8 132 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 FAM162BQ5T6X4 162 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 PRR27Q6MZM9 219 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 RBPMS2Q6ZRY4 209 aaKnown RBP6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 OR2K2Q8NGT1 345 aa6.94□□□□□ -1.3
TMEM39A-208ENST00000486159 TRAV8-1A0A0A6YYK1 113 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 TRBV7-9A0A0J9YWB2 115 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 APOHP02749 345 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 SMUG1Q53HV7 270 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 C9orf47Q6ZRZ4 202 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 ZC2HC1AQ96GY0 325 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 C16orf92Q96LL3 132 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 RHPN1-AS1Q9BWJ2 59 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 NRN1Q9NPD7 142 aa6.93□□□□□ -1.3
TMEM39A-208ENST00000486159 TRAV8-2A0A0B4J237 113 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 HIGD1CA8MV81 97 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 ZNF207O43670 478 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 ID1P41134 155 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 TMEM78Q5T7P6 136 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 NUP35Q8NFH5 326 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 OR2D3Q8NGH3 330 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 SGK494Q96LW2 274 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 LINC00477Q96M19 166 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 NEU1Q99519 415 aa6.92□□□□□ -1.3
TMEM39A-208ENST00000486159 IGKV2-40A0A087WW87 121 aaPredicted RBP6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 IGHV3-66A0A0C4DH42 116 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 FABP5P3A8MUU1 101 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 SNURFLB1AK76 121 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 SOCS3O14543 225 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 IGKV2D-40P01614 121 aaPredicted RBP6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 ZNF138P52744 262 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 HBBP68871 147 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H1AQ02539 215 aaPredicted RBP6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 ZNF124Q15973 351 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 TMEM136Q6ZRR5 245 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 BORCS7Q96B45 105 aa6.91□□□□□ -1.3
TMEM39A-208ENST00000486159 IGHV3OR16-13A0A075B7E8 117 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 IGHV3-49A0A0A0MS15 119 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 IGHV3-74A0A0B4J1X5 117 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 A0A0J9YWU9 116 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 A0A1B0GXF2 115 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 TMEM189A5PLL7 270 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 S100A2P29034 98 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 AKR1D1P51857 326 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 TCL1AP56279 114 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 Q0VG73 95 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 RIGQ13278 110 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 ZNF738Q8NE65 137 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 OR10J6PQ8NGY7 276 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 VGLL1Q99990 258 aa6.9□□□□□ -1.3
TMEM39A-208ENST00000486159 LOC102724200A0A096LPH7 203 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 A0A1B0GUT8 65 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 ZNF705FA8MVS1 300 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 SH2D1AO60880 128 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 CA1P00915 261 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 APCSP02743 223 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 CRISP2P16562 243 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 CRIP1P50238 77 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 RAB4BP61018 213 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 OR10J3Q5JRS4 329 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 MRPL54Q6P161 138 aaKnown RBP6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 TCF24Q7RTU0 167 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 HIST3H2BBQ8N257 126 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 RNF182Q8N6D2 247 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 GATD1Q8NB37 220 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 AGPAT4-IT1Q9H0P7 198 aa6.89□□□□□ -1.31
TMEM39A-208ENST00000486159 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 F2Z2F3 143 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 HLA-DMBP28068 263 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 RPL11P62913 178 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 PAFAH1B2P68402 229 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 DEFB135Q30KP9 77 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 ODF3L2Q3SX64 289 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 APRG1Q8IVJ8 170 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 LINC00518Q8N0U6 118 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 GTSF1Q8WW33 167 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 LINC00476Q8WZB0 136 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 PACRGQ96M98 296 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 C8orf49Q96NF6 230 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 FRAS1Q86XX4 4008 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
TMEM39A-208ENST00000486159 IGKV3-7A0A075B6H7 116 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 PRAC2D3DTV9 90 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 LY6G6CO95867 125 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 ESDP10768 282 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 DNLZQ5SXM8 178 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms