RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 APOMO95445 188 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 COX6B1P14854 86 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 HLA-DMBP28068 263 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 DLX1P56177 255 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 FOXI1Q12951 378 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 C9orf47Q6ZRZ4 202 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 SH2D6Q7Z4S9 175 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 FAM110DQ8TAY7 271 aaPredicted RBP3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 ZNF418Q8TF45 676 aaPredicted RBP3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 AGPAT4-IT1Q9H0P7 198 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 PCNX2A6NKB5 2137 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 IGHV1-69DA0A0B4J2H0 117 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 CLPSL1A2RUU4 121 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 TSPAN13O95857 204 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 PPP1R17O96001 155 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 CD7P09564 240 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 PRTN3P24158 256 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 EFNA4P52798 201 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 CRYBA4P53673 196 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 CKS1BP61024 79 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 SUMO2P61956 95 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 SCGB2A2Q13296 93 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 PAPPA-AS1Q5QFB9 102 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 TMEM78Q5T7P6 136 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 MINOS1Q5TGZ0 78 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 AMTNQ6UX39 209 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 C1orf122Q6ZSJ8 110 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 TEN1Q86WV5 123 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 PPDPFLQ8WWR9 84 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 BAALCQ8WXS3 180 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 LINC01600Q96MT4 127 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 PRADC1Q9BSG0 188 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 ONECUT1Q9UBC0 465 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 CYSLTR1Q9Y271 337 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 MINOS1-NBL1R4GNA1 71 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 S4R3C0 116 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 FAM186AA6NE01 2351 aa3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 INTS1Q8N201 2190 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-206ENST00000485737 TRBV20-1A0A075B6N2 111 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 IGHV7-81A0A0B4J1V7 117 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 TRAV26-2A0A0B4J265 109 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 TRBV7-9A0A0J9YWB2 115 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 SPAARA0A1B0GVQ0 90 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 PRB4P10163 310 aaPredicted RBP3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 INSL3P51460 131 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 PRB3Q04118 309 aaPredicted RBP3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 Q6ZUT4 128 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 C9orf139Q6ZV77 190 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 NFE4Q86UQ8 179 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 APRG1Q8IVJ8 170 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 DEFB124Q8NES8 71 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 ITLN2Q8WWU7 325 aaPredicted RBP3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 RASL10AQ92737 203 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 SCGB3A1Q96QR1 104 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 DPH3P1Q9H4G8 78 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 GEMIN7Q9H840 131 aaKnown RBP3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 UFC1Q9Y3C8 167 aa3.55□□□□□ -1.84
SMARCC1-206ENST00000485737 FREM2Q5SZK8 3169 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 IGLV4-69A0A075B6H9 119 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 IGHV4OR15-8A0A075B7B6 117 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 TRAV26-1A0A087WT03 109 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 A0A087WW49 117 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 A0A0J9YY99 117 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 PRSS29PA6NIE9 313 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 ZNF815PA8K554 130 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 B5MCH6 92 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 H3BVH4 76 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 PPIFP30405 207 aaKnown RBP3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 XGP55808 180 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 HERVK_113P61574 105 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 ATP5G2Q06055 141 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 FHL3Q13643 280 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 C15orf32Q32M92 178 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 FBXL19-AS1Q494R0 122 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 C19orf54Q5BKX5 351 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 PRR9Q5T870 116 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 SPANXN1Q5VSR9 72 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 C2orf66Q6UXQ4 117 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 VMO1Q7Z5L0 202 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 NDUFA11Q86Y39 141 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 RNF182Q8N6D2 247 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 Q8N9W7 124 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 GLMPQ8WWB7 406 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 PLEKHB2Q96CS7 222 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 TMEM141Q96I45 108 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 RAX2Q96IS3 184 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 FAM19A4Q96LR4 140 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 CARD19Q96LW7 228 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 METTL26Q96S19 204 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 TIMM17AQ99595 171 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 CITED1Q99966 193 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 ERG28Q9UKR5 140 aa3.54□□□□□ -1.84
SMARCC1-206ENST00000485737 TRBV7-1A0A0A6YYK4 115 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 TRAV21A0A0B4J279 112 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 C11orf86A6NJI1 115 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 A8MWV9 139 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 TMEM262E9PQX1 116 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 LYNX1G3V0Z9 82 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 SOCS3O14543 225 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms