RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 PHF3Q92576 2039 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP2-216ENST00000483412 MRPL55Q7Z7F7 128 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP2-216ENST00000483412 Q8TCH9 128 aa7.55□□□□□ -1.2
CDK5RAP2-216ENST00000483412 ACACAQ13085 2346 aa7.55□□□□□ -1.2
CDK5RAP2-216ENST00000483412 TAX1BP3O14907 124 aa7.55□□□□□ -1.2
CDK5RAP2-216ENST00000483412 CRYGCP07315 174 aa7.55□□□□□ -1.2
CDK5RAP2-216ENST00000483412 ETV2O00321 342 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP2-216ENST00000483412 ACYP1P07311 99 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 WFDC2Q14508 124 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 DYNAPQ8N1N2 210 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 RNF166Q96A37 237 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 C2orf16Q68DN1 1984 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 hADV29S1A0JD25 119 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 DOCK9Q9BZ29 2069 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 GNRH2O43555 120 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 SPANXB1Q9NS25 103 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 ORMDL1Q9P0S3 153 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 YLPM1P49750 1951 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 NDUFA4O00483 81 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 FOXE3Q13461 319 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 RSPO1Q2MKA7 263 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 UBE2E1P51965 193 aa7.54□□□□□ -1.2
CDK5RAP2-216ENST00000483412 GATA4P43694 442 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 CR1LQ2VPA4 569 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 LINC01619G3V211 115 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 FXYD2P54710 66 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 CLPSL2Q6UWE3 100 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 FAM236AA0A1B0GUQ0 79 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 FAM236BA0A1B0GV22 79 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 Q9H8V8 135 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 IGKV2-29A2NJV5 120 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 G3V4G9 280 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 SPRY2O43597 315 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 LOXP28300 417 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 ICOSQ9Y6W8 199 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 IGLV3-1P01715 115 aa7.53□□□□□ -1.2
CDK5RAP2-216ENST00000483412 F5H768 121 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGHG2P01859 326 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 LINC00311Q8N616 119 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 ZNF491Q8N8L2 437 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGF2BP2-AS1Q96M15 143 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 KIAA2026Q5HYC2 2103 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGKV3D-7A0A0C4DH55 119 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 MUSTN1Q8IVN3 82 aa7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP2-216ENST00000483412 A0A0B4J2C4 111 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 J3KT08 172 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 RHOHQ15669 191 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 C3orf56Q8N813 242 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 A0A096LPF7 62 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 FOXI1Q12951 378 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 A0A1B0GX51 115 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 LINC01356Q8N9X3 169 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 DAD1P61803 113 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 SRSF2Q01130 221 aaKnown RBP7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 MRPL53Q96EL3 112 aaKnown RBP7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 FER1L5A0AVI2 2057 aa7.51□□□□□ -1.21
CDK5RAP2-216ENST00000483412 A4D1N5 150 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 F6UB75 175 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 DENND4CQ5VZ89 1909 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGHV1-69DA0A0B4J2H0 117 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGHV7-4-1A0A0J9YVY3 117 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 ATOX1O00244 68 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGHV1-69P01742 117 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 HERV-K104P63124 156 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 MRPL23Q16540 153 aaKnown RBP7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 PRO3102Q9H379 93 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 PRB2P02812 416 aaPredicted RBP7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 DEFB105AQ8NG35 78 aa7.5□□□□□ -1.21
CDK5RAP2-216ENST00000483412 WT1P19544 449 aaPredicted RBP7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 AGPAT4-IT1Q9H0P7 198 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 SLC25A29Q8N8R3 303 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 PLXND1Q9Y4D7 1925 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 ICE1Q9Y2F5 2266 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGLV3-9A0A075B6K5 115 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 XCL1P47992 114 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 PLXNB3Q9ULL4 1909 aa7.49□□□□□ -1.21
CDK5RAP2-216ENST00000483412 ANGP03950 147 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 Q8NFD4 153 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 NDUFS5O43920 106 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 GP9P14770 177 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 GTSF1Q8WW33 167 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 MSRB1Q9NZV6 116 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 IGHV4-4A0A075B6R2 117 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 DEFB121Q5J5C9 76 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 HIGD1BQ9P298 99 aa7.48□□□□□ -1.21
CDK5RAP2-216ENST00000483412 MSMBP08118 114 aa7.47□□□□□ -1.21
CDK5RAP2-216ENST00000483412 PSMB8P28062 276 aa7.47□□□□□ -1.21
CDK5RAP2-216ENST00000483412 FAM215AQ9Y5M1 114 aa7.47□□□□□ -1.21
CDK5RAP2-216ENST00000483412 SP5Q6BEB4 398 aaPredicted RBP7.47□□□□□ -1.21
CDK5RAP2-216ENST00000483412 COL6A6A6NMZ7 2263 aa7.47□□□□□ -1.21
CDK5RAP2-216ENST00000483412 COL4A4P53420 1690 aaPredicted RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms